CoCalc -- JATS-archivearticle1-mathml3.dtd

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Path: blob/main/tests/docs/jats/xsd/JATS-Archiving-1-2-MathML3-DTD/JATS-archivearticle1-mathml3.dtd
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<!-- ============================================================= -->
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<!--  MODULE:    Journal Archiving and Interchange DTD (MathML 3.0)-->
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<!--  VERSION:   ANSI/NISO JATS Version 1.2 (Z39.96-2019)          -->
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<!--  DATE:      February 2019                                     -->
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<!--                                                               -->
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<!-- ============================================================= -->
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<!-- ============================================================= -->
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<!--                    PUBLIC DOCUMENT TYPE DEFINITION            -->
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<!--                        TYPICAL INVOCATION                     -->
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<!--
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"-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD with MathML3 v1.2 20190208//EN"
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     Delivered as file "JATS-archivearticle1-mathml3.dtd"
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     Available at:
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     http://jats.nlm.nih.gov/archiving/1.2/JATS-archivearticle1.dtd
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                                                                   -->
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<!-- ============================================================= -->
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<!-- ============================================================= -->
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<!-- SYSTEM:     Journal Archiving and Interchange DTD of the      --> 
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<!--             JATS DTD Suite                                    -->         
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<!--                                                               -->
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<!-- PURPOSE:    DTD to describe a full-text journal article       -->
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<!--                                                               -->
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<!--             The Journal Archiving and Interchange DTD is an   -->
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<!--             application of the ANSI/NISO Z39.96 JATS Journal  -->
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<!--             Article Tag Set. It describes journal articles    -->
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<!--             and some non-article material such as product     -->
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<!--             and book reviews for repository or interchange    -->
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<!--             purposes. It describes both the metadata for a    -->
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<!--             journal article and the  full content of          -->
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<!--             the article.                                      -->
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<!--                                                               -->
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<!--             This DTD was constructed using the modules in the -->
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<!--             JATS DTD Suite, using almost no customization.    -->
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<!--                                                               -->
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<!-- TAG SET SPONSOR                                               -->
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<!--             National Center for Biotechnology                 -->
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<!--                Information (NCBI)                             -->
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<!--             National Library of Medicine (NLM)                -->
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<!--                                                               -->
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<!-- CREATED FOR:                                                  -->
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<!--             This DTD was created from the JATS DTD Suite.     -->
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<!--             Digital archives and publishers may use the       -->
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<!--             DTD as is for markup of journal literature or     -->
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<!--             related material for archiving and transferring   -->
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<!--             such material between archives or create a        -->
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<!--             custom XML DTD from the Suite for                 -->
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<!--             these purposes.                                   -->
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<!--                                                               -->
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<!--             This DTD is in the public domain. An organization -->
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<!--             that wishes to create its own DTD from the suite  -->
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<!--             may do so without permission from NLM.            -->
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<!--                                                               -->
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<!--             The suite has been set up to be extended using a  -->
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<!--             new DTD file and a new DTD-specific customization -->
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<!--             module to redefine the many Parameter Entities.   -->
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<!--             Do not modify the suite directly or redistribute  -->
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<!--             modified versions of the suite.                   -->
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<!--                                                               -->
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<!--             In the interest of maintaining consistency and    -->
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<!--             clarity for potential users, NLM requests:        -->
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<!--                                                               -->
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<!--             1. If you create a DTD from the JATS DTD Suite    -->
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<!--                and intend to stay compatible with the suite,  -->
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<!--                then please include the following statement    -->
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<!--                as a comment in all of your DTD modules:       -->
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<!--                   "Created from, and fully compatible with,   -->
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<!--                    the ANSI/NISO Z39.96 Journal Article Tag   -->
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<!--                    Suite (JATS)."                             -->
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<!--                                                               -->
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<!--             2. If you alter one or more modules of the suite, -->
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<!--                then please rename your version and all its    -->
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<!--                modules to avoid any confusion with the        -->
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<!--                original suite. Also, please include the       -->
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<!--                following statement as a comment in all your   -->
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<!--                DTD modules:                                   -->
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<!--                   "Based in part on, but not fully compatible -->
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<!--                    with, the ANSI/NISO Z39.96 Journal Article -->
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<!--                    Tag Suite (JATS)."                         -->
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<!--                                                               -->
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<!-- ORIGINAL CREATION DATE:                                       -->
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<!--             December 2002                                     -->
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<!--                                                               -->
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<!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96   -->
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<!--             Working Group. Mulberry Technologies was          -->
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<!--             supported by National Center for Biotechnology    -->
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<!--             Information (NCBI), a center of the US National   -->
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<!--             Library of Medicine (NLM).                        -->
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<!--                                                               -->
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<!--             The Journal Archiving and Interchange DTD is      -->
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<!--             built from the JATS DTD Suite.                    -->
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<!--                                                               -->
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<!--             This DTD and the Suite are a continuation of      -->
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<!--             the work done by NCBI, Mulberry Technologies,     -->
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<!--             and Inera Inc. on the NLM Journal Archiving       -->
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<!--             and Interchange DTD Suite, which was originally   -->
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<!--             released in December, 2002.                       -->
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<!--                                                               -->
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<!--             NLM thanks the Harvard University Libraries, both -->
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<!--             for proposing that a draft archiving NLM DTD for  -->
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<!--             life sciences journals be extended to accommodate -->
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<!--             journals in all disciplines and for sponsoring    -->
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<!--             Inera Inc.'s collaboration with other DTD         -->
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<!--             authors in completing NLM Version 1.0. The        -->
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<!--             Andrew W. Mellon Foundation provided support for  -->
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<!--             these important contributions.                    -->
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<!--                                                               -->
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<!--             Suggestions for refinements and enhancements to   -->
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<!--             this DTD should be sent in email to:              -->
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<!--                 [email protected]                         -->
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<!-- ============================================================= -->
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<!-- ============================================================= -->
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<!--                    DTD VERSION/CHANGE HISTORY                 -->
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<!-- ============================================================= -->
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<!--
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     =============================================================
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Version  Reason/Occasion                   (who) vx.x (yyyy-mm-dd)
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   ==============================================================
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     JATS Version 1.2 (ANSI/NISO Z39.96-2019)
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                                   (DAL/BTU) v1.2     (2019-02-08)
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     NISO JATS is a continuing maintenance NISO Standard, which 
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     requires voting by the both the NISO and ANSI membership 
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     to be changed. This version of the NISO JATS was approved 
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     by ANSI vote on Feb 08, 2019, so it supersedes all Committee 
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     Drafts as well as the draft version JATS 1.2 2018 (the version
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     submitted for vote), becoming NISO JATS v1.2 20190208 
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     (ANSI/NISO Z39.96-2019).
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 34. JATS "1.2" becomes "v1.2 20190208" (final ANSI vote date)
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     "ANSI/NISO Z39.96-2015" becomes "ANSI/NISO Z39.96-2019"
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    ==============================================================
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     JATS Version 1.2 (ANSI/NISO Z39.96-2018)
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     and BITS 2.1 (v2.0 20180401)
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                                   (DAL/BTU) v1.2     (2018-11-30)
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     NISO JATS is a continuing maintenance NISO Standard, which 
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     requires voting by the both the NISO and ANSI membership 
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     to be changed. This version of the NISO JATS was approved 
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     by ANSI and NISO vote, so it supersedes all Committee Drafts
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     and becoming NISO JATS 1.2 (ANSI/NISO Z39.96-2018).
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 33. @dtd-version becomes "1.2d" from "1.2d2"
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 32. BITS "2.1" and "v2.0 20180401" remains unchanged.
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     JATS "1.2d2" and "v1.2d2 20180401" became
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     JATS "1.2" and "v1.2 20181130" 
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   =============================================================
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     BITS Version 2.1                (DAL/BTU) v2.1    (2018-04-01)
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     JATS Version 1.2d2              (DAL/BTU) v1.2d2  (2018-04-01)
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     JATS is a continuing maintenance NISO Standard, which
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     requires voting by the ANSI and NISO memberships to be changed. 
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     BITS is under continuous maintenance, and is modified at the
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     discretion of the working group.
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     This draft DTD represents an interim version of the
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     non-normative JATS DTD Suite, as an indication to JATS users
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     the decisions that have been made by the JATS Standing
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     Committee. This draft has not yet been given public review 
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     or voting. The formal public identifiers were changed in the 
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     modules and the catalogs.
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 31. DATE-NOT-AVAILABLE - Inside <article-meta> and <front-stub>,
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     a new element <pub-date-not-available> was added as an
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     alternatives to <pub-date>. The meaning is that a 
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     publication date was (for whatever reason) not available. 
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     Presence of the element says nothing about publication 
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     status.
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 30. INLINE INDEX TERMS  - Added invocation to BITS inline
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     (embedded) index term model
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 29. @dtd-version becomes "1.2d2" from "1.2d1"
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 28. BITS "2.0" and "v2.0 20151225" became
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     BITS "2.1" and "v2.1 20180401". 
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     JATS "1.2d1" and "v1.2d1 20171231" became
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     JATS "1.2d2" and "v1.2d2 20180401". 
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     No module names were changed. 
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    =============================================================
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     JATS Version 1.2d1 (ANSI/NISO Z39.96-2015)
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                                   (DAL/BTU) v1.2d2  (2017-12-31)
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     NISO JATS is a continuing maintenance NISO Standard, which
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     requires voting by the ANSI and NISO memberships to be changed. 
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     This draft DTD represents an interim version of the
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     non-normative JATS DTD Suite, as an indication to JATS users
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     the decisions that have been made by the JATS Standing
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     Committee. This draft has not yet been given public review 
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     or voting. The formal public identifiers were changed in the 
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     modules and the catalogs.
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 27. JATS "1.2d1" and "v1.2d1 20170631" became
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     JATS "1.2d1" and "v1.2d1 20171231". 
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    =============================================================
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     JATS Version 1.2d1              (DAL/BTU) v1.2d1  (2017-06-31)
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     NISO JATS is a continuing maintenance NISO Standard, which
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     requires voting by the ANSI and NISO memberships to be changed. 
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     This draft DTD represents an interim version of the
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     non-normative JATS DTD Suite, as an indication to JATS users
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     the decisions that have been made by the JATS Standing
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     Committee. This draft has not yet been given public review 
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     or voting. The formal public identifiers were changed in the 
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     modules and the catalogs.
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 26. xsi:noNamespaceSchemaLocation added to attribute list of
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     <article>. Most modern processors do not need this, but
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     a user with an older processor requested it, so the JATS
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     Standing Committee acquiesced. This pseudo-attribute
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     cannot be used with a DOCTYPE declaration.
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 25. FRONT STUB MODEL
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     - ARTICLE VERSION - Added new element <article-version>
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       inside <front-stub> to hold one version number for the 
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       article. <article-version> element may repeat inside
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       <article-version-alternatives> to hold version numbers 
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       from different systems.
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     - NO DATE - <pub-date> (optional repeatable) is now
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       followed by the optional new element 
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       <pub-date-not-available>. 
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     - PUB-HISTORY - <pub-history> (optional) added to hold
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       <event>s.
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 24. DTD version "1.2d1" from 1.1 
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 23. JATS became version "1.2d1" and "v1.2d1 20170631" 
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    =============================================================
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     JATS Version 1.1                (DAL/BTU) v1.1  (2015-12-15)
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     JATS is a continuing maintenance NISO Standard, which
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     requires voting by the ANSI and NISO memberships to be changed. 
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     JATS 1.1 was approved in late 2015, so the formal public 
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     identifiers were changed in the modules and the catalogs.
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     No model or attribute changes were made at this time. 
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 22. JATS became version "1.1" and "v1.1 20151215"
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     =============================================================
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     JATS Version 1.1d3             (DAL/BTU) v1.1d3  (2015-03-01)
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     The changes in this release are in response to NISO 
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     License and Indicators Recommended Practice.
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     NISO JATS is a continuing maintenance NISO Standard, which 
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     requires voting by the NISO membership to be changed. This
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     Committee Draft 1.1d3 will be sent to the NISO voting
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     membership, to become (if approved) NISO JATS 1.1.
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     This draft DTD represents an interim version of the
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     non-normative JATS DTD Suite, as an indication to JATS users
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     the decisions that have been made by the JATS Standing
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     Committee.
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 21. ALI - Added ALI namespace for NISO Access and Indicator 
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     license reference and free to read elements.
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 20. JATS became version "1.1d3" and "v1.1d3 20150301"
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     =============================================================
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     JATS Version 1.1d2              (DAL/BTU) v1.1d2 (2014-09-30)
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     NISO JATS is a continuing maintenance NISO Standard, which 
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     requires voting by the NISO membership to be changed. This
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     Committee Draft 1.1d2 will be sent to the NISO voting
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     membership, to become (if approved) NISO JATS 1.1.
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     This catalog represents an interim version of the
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     non-normative JATS DTD Suite, as an indication to JATS users
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     the decisions that have been made by the JATS Standing
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     Committee.
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19. <VOLUME> INSIDE <ARTICLE-META> and <FRONT-STUB>
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   - Allowed <volume> to repeat inside <article-meta>, the types to 
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     be distinguished using @content-type
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   - Added new optional element <volume-issue-group> inside 
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     <article-meta) following all volume and issue elements
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     to hold volume-issue pairs (or n-tuples) when a second
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     and subsequent <volume> has its own related issue
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     information.
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 18. JATS became version "1.1d2" and "v1.1d2 20140930//EN"
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     =============================================================
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     NISO JATS Version 1.1d1           (DAL/BTU) v1.1 (2013-11-15)
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     ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1) 
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     NISO JATS Standing Committee met and answered the requests and
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     suggestions from the NISO request forms.
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     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,  
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     XSDs, RNGs and supporting documentation are available at
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           http://jats.nlm.nih.gov/1.0/
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 17. MATHML 3.0 - Created a new version of the Archiving DTD to
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     take MathML 3.0 instead of MathML 2.0.
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     Nothing else changed from regular Archiving DTD.
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     Call to MathML setup module changed and added call to the
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     specific MathML 3.0 modules.
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 16. DTD Version - Updated the DTD-version attribute to "1.1d1" and 
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     the formal public identifier to the date: "v1.1d1 20130915//EN".
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 15. GLOBAL ATTRIBUTES - Added the new module for Common (global)
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     attributes: %JATS-common-atts.ent;, called in before the
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     customizations models module.
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 14. GLOBAL ATTRIBUTES - Added the new parameter entity 
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         %jats-common-atts;
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     to every element in this module. This PE adds (for now) the
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     @id attribute and the @xml:base attribute to every element,
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     whether metadata or narrative.
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     Since the @id in this parameter entity is optional, a second
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     parameter entity jats-common-atts-id-required was also added.
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     The two are kept in sync with the jats-base-atts parameter 
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     entity.
336
     This added a new attribute list to:
337
      - back
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      - front
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      - front-stub
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 13. ABSTRACTS AND KEYWORDS
342
       Changed "abstract*" to "(%abstract.class;)*"
343
       and "kwd-group*" to "(%kwd-group.class;)*" since those
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       classes now exist. Elements should have a limited number of
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       ways to be invoked.
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        - article-meta (through %article-meta-model;)
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        - front-stub (through %front-stub-model;)
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     =============================================================
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     NISO JATS Version 1.0             (DAL/BTU) v1.0 (2012-xx-xx)
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     ANSI/NISO Z39.96-2012 (Version 1.0) 
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     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,  
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     XSDs, RNGs and supporting documentation are available at
356
           http://jats.nlm.nih.gov/1.0/
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 12. RELATED OBJECT - Added <related-object> everywhere
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     <related-article> was used, including inside 
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     <front-stub> using front-stub-model.
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 11. Updated the DTD-version attribute to "1.0" and the formal
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     public identifier to the date: "v1.0 20120330//EN".
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     =============================================================
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     Version 0.4                       (DAL/BTU) v0.4 (2011-01-31)
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     This Tag Set is in the process of becoming a NISO standard.
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     The version numbers are starting over from 0.4", as a Trial
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     Use Draft, to be made into "Version 1.0" when the Tag Suite 
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     becomes a NISO standard. Thus, the version number that would
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     have been "NLM Version 3.1 Draft" has become NISO JATS
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     "Version 0.4".
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     Details on NISO Trial Use Draft Version 0.4 are available at
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           http://jats.nlm.nih.gov/JATS-0.4.
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 10. Updated the DTD-version attribute to "0.4" 
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  9. Updated the public identifier to "v0.4 20110131", 
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     modified the formal public identifier to include "JATS (Z39.96)",
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     and the filename as delivered to include "JATS" and the
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     new version number "0".
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  8. BODY ATTRIBUTES - Added attribute list and new PE %body-atts;
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     to the model of <body>. The only current attribute is
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     @specific-use, which indicates, for example, not a real
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     tagged XML body, but a 'bag of words" for indexing purposes.
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  7. KEYWORD GROUP - Made <kwd-group> repeatable inside
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     <front-stub> by modifying %front-stub-model;
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  6. I18N - Changed the default for @xml:lang from "en" to
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     #IMPLIED, so that the @xml:lang would inherit properly and
395
     not need to be over-ridden in
396
      - <sub-article> through %sub-article-atts;
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      - <response> through %response-atts;
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  5. AFFILIATION ALTERNATIVES - Added the element <aff-alternatives>
400
     to <front-stub> through %front-stub-model;. This element
401
     will hold multiple <aff>s that are a representation of a
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     single affiliation, for example, the name of an institution
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     in two languages or two scripts.
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  4. FRONT MATTER - Modified %front-model; to add the elements:
406
        ack | bio | fn-group | glossary (via %front.class;)
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     to front matter content model.
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  3. LANGUAGE CODES - Codes for languages as well as variants,
410
     transliterations, regions, scripts, and combinations
411
     such as "Jpan"(Han + Hiragana + Katakana). These values should be
412
     taken from RFC 5646/W3C/IANA Subtag Registry recommendations
413
     and can be found online at:
414
       http://www.iana.org/assignments/language-subtag-registry
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     =============================================================
417
     Version 3.0                       (DAL/BTU) v3.0 (2007-10-31)
418

419
     Version 3.0 is the first non-backward-compatible release.
420
     In addition to the usual incremental changes, some
421
     elements and attributes have been renamed and/or remodeled
422
     to better meet user needs and to increase tag set consistency.
423
     All module change histories are available through the Tag Suite
424
     web site at http://dtd.nlm.nih.gov.
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426
     Details on version 3.0 are available at
427
           http://dtd.nlm.nih.gov/3.0.
428

429
  2. Changed default @xml:lang from "EN" from "en" to match latest
430
     RFC 4646/W3C/IANA Subtag Registry recommendations
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  1. Updated public identifier to "v3.0 20071031//EN"              -->
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<!-- ============================================================= -->
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<!-- Details concerning 
436
     ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs, 
437
     RNGs and supporting documentation are available at
438
           http://jats.nlm.nih.gov/1.1/
439
-->
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<!-- ============================================================= -->
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<!--                    DESIGN CONSIDERATIONS                      -->
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<!-- ============================================================= -->
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<!-- MODULAR DTD LIBRARY
446
                        A set of journal archiving and interchange
447
                        DTD modules was written as the basis for
448
                        publishing, interchange, and repository
449
                        DTDs, with the intention that DTDs for
450
                        specific purposes, such as this Journal
451
                        Archiving and Interchange DTD, would be
452
                        developed based on them.
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454
                        This archiving DTD has been designed to
455
                        be descriptive, open, and inclusive to
456
                        allow journal articles to be translated into
457
                        this format as conveniently as possible
458
                        from a wide variety of proprietary journal
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                        article DTDs (such as Blackwell, Keton, and
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                        Ovid).
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                        This Archiving DTD has been developed from
463
                        the JATS DTD Suite modules, in the approved 
464
                        manner, making changes to the declarations 
465
                        in those modules by over-riding Parameter 
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                        Entity contents by redefining the entities 
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                        in the:
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                            %archivecustom-classes.ent;
469
                            %archivecustom-mixes.ent;
470
                            %archivecustom-models.ent;
471
                        modules, which are called from this DTD file.
472
                        No changes to any of the original JATS DTD
473
                        Suite modules are required in order to 
474
                        use this DTD.                              -->
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<!-- ============================================================= -->
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<!--                    MODULES OF MODULES INVOKED                 -->
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<!-- ============================================================= -->
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<!--                    MODULE TO NAME DTD-SPECIFIC MODULES        -->
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<!--                    Names all DTD-specific external modules    -->
484
<!ENTITY % archivecustom-modules.ent 
485
                        PUBLIC
486
"-//NLM//DTD JATS (Z39.96) Journal Archiving DTD-Specific Modules v1.2 20190208//EN" 
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"JATS-archivecustom-modules1.ent"                                    >
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%archivecustom-modules.ent;
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<!--                    MODULE TO NAME THE MATHML 3.0 MODULES      -->
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<!--                    Names all DTD-specific external modules    -->
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<!ENTITY % mathml3-modules.ent
494
                        PUBLIC
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"-//NLM//DTD JATS (Z39.96) JATS MathML 3.0 Modules v1.2 20190208//EN"
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"JATS-mathml3-modules1.ent"                                          >
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%mathml3-modules.ent;
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<!--                    MODULE TO NAME THE MODULES                 -->
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<!--                    Declares all the external modules that are
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                        part of the modular JATS DTD Suite library. 
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                        Thus it does NOT declare itself; 
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                        the DTD-specific module-of-modules; 
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                        any of the DTD-specific class,
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                        mix, or model over-ride modules; or any 
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                        new content modules specific to this DTD.
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                        Those are declared in the DTD-specific
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                        module of modules.
511
                           Since this module declares but does not
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                        invoke modules, this DTD then invokes any
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                        modules it uses by referencing the external
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                        Parameter Entities defined in the Module of
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                        Modules. To include a set of elements (such
516
                        as all the lists or the table elements) this
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                        module defines the external Parameter Entity
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                        for the module(s) that contains the table
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                        declarations and the DTD references that
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                        entity.                                    -->
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<!ENTITY % modules.ent  PUBLIC
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"-//NLM//DTD JATS (Z39.96) JATS DTD Suite Module of Modules v1.2 20190208//EN"
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"JATS-modules1.ent"                                                  >
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%modules.ent;
525

526
<!-- ============================================================= -->
527
<!--                    NISO ALI NAMESPACE SETUP                   -->
528
<!-- ============================================================= -->
529

530

531
<!--                    DEFINE ALI NAMESPACE ATTRIBUTE AND PREFIX  -->
532
<!--                    Names the module defines the NISO Access and 
533
                        Indicators Exchange Model namespace, prefix, 
534
                        and pseudo-attribute @xmlns.               -->
535
%JATS-ali-namespace.ent;
536
                                                            
537

538
<!-- ============================================================= -->
539
<!--                    SET UP COMMON (ALL ELEMENT) ATTRIBUTES     -->
540
<!-- ============================================================= -->
541

542

543
<!--                    COMMON ATTRIBUTES MODULE                   -->
544
<!--                    Set up the common attributes, those used on
545
                        nearly all elements.
546
                        Must be called before the custom models
547
                        module.                                    -->
548
%JATS-common-atts.ent;
549

550

551
<!-- ============================================================= -->
552
<!--                    CUSTOMIZATION MODULES INVOKED              -->
553
<!--                    Note: These modules must be called after   -->
554
<!--                    all Module of Modules but before any other -->
555
<!--                    modules. Unlike any other grouping, order  -->
556
<!--                    of these modules matters.                  -->
557
<!-- ============================================================= -->
558

559

560
<!--                    DTD-SPECIFIC CLASS CUSTOMIZATIONS MODULE   -->
561
<!--                    Names the module that holds the DTD-specific
562
                        class definitions for the Journal Archiving
563
                        and Interchange DTD that over-rides the Suite
564
                        defaults.
565
                        (Defined in %archivecustom-modules.ent; )  -->
566
%archivecustom-classes.ent;
567

568

569
<!--                    DEFAULT ELEMENT CLASSES MODULE             -->
570
<!--                    Names the module that holds the standard
571
                        class definitions for the JATS DTD Suite.  -->
572
%default-classes.ent;
573

574

575
<!--                    DTD-SPECIFIC MIX CUSTOMIZATIONS MODULE     -->
576
<!--                    Set up the Parameter Entities and element
577
                        class definitions that will be used to
578
                        over-ride some element mixes in this DTD.
579
                        (Defined in %archivecustom-modules.ent; )  -->
580
%archivecustom-mixes.ent;
581

582

583
<!--                    DEFAULT MIX CUSTOMIZATIONS MODULE          -->
584
<!--                    Names the module that holds the standard
585
                        mix definitions for the JATS DTD Suite.    -->
586
%default-mixes.ent;
587

588

589
<!--                    DTD-SPECIFIC MODELS/ATTRIBUTES CUSTOMIZATIONS
590
                        MODULE                                     -->
591
<!--                    Names the module that holds the over-rides
592
                        of content models, attribute lists, elements
593
                        lists to be used in content models, and
594
                        attribute values. These are DTD-specific.
595
                        (Defined in %archivecustom-modules.ent; )  -->
596
%archivecustom-models.ent;
597

598

599
<!-- ============================================================= -->
600
<!--                    COMMON (SHARED) ELEMENTS MODULE INVOKED    -->
601
<!-- ============================================================= -->
602

603

604
<!--                    COMMON (SHARED) DECLARATIONS               -->
605
<!--                    Declarations for elements, attributes,
606
                        entities, and Notations that are shared by
607
                        more than one class module. Note: Must be
608
                        called before any of the class modules.    -->
609

610
%common.ent;
611

612

613
<!-- ============================================================= -->
614
<!--                    JOURNAL ARTICLE CLASS ELEMENTS (alpha)     -->
615
<!-- ============================================================= -->
616

617
<!--                    ARTICLE METADATA ELEMENTS                  -->
618
%articlemeta.ent;
619

620

621
<!--                    BACK MATTER ELEMENTS                       -->
622
%backmatter.ent;
623

624

625
<!--                    DISPLAY (GRAPHICAL) ELEMENTS               -->
626
%display.ent;
627

628

629
<!--                    FORMATTING ELEMENT CLASSES                 -->
630
<!--                    Elements that change rendition/display.    -->
631
%format.ent;
632

633

634
<!--                    FUNDING ELEMENTS                           -->
635
<!--                    Elements that describe the sponsorship or
636
                        open access                                -->
637
%funding.ent;
638

639

640
<!--                    JOURNAL METADATA ELEMENTS                  -->
641
%journalmeta.ent;
642

643

644
<!--                    LINK CLASS ELEMENTS                        -->
645
%link.ent;
646

647

648
<!--                    LIST CLASS ELEMENTS                        -->
649
%list.ent;
650

651

652
<!--                    MATH ELEMENTS                              -->
653
%math.ent;
654

655

656
<!--                    NLM CITATION ELEMENT                       -->
657
%nlmcitation.ent;
658

659

660
<!--                    PARAGRAPH-LEVEL ELEMENTS                   -->
661
%para.ent;
662

663

664
<!--                    PHRASE-LEVEL ELEMENTS                      -->
665
%phrase.ent;
666

667

668
<!--                    BIBLIOGRAPHIC REFERENCE (CITATION)
669
                        CLASS ELEMENTS                             -->
670
%references.ent;
671

672

673
<!--                    RELATED OBJECT ELEMENT                     -->
674
<!--                    Defines the <related-object> element to
675
                        describe a related object such as a
676
                        related book or a dataset.                 -->
677
%related-object.ent;
678

679

680
<!--                    SECTION ELEMENTS                           -->
681
%section.ent;
682

683

684
<!-- ============================================================= -->
685
<!--                    THE REST OF THE EXTERNAL MODULES INVOKED   -->
686
<!-- ============================================================= -->
687

688

689
<!--                    BITS EMBEDDED INDEX ELEMENTS MODULE        -->
690
<!--                    Element declarations the index elements
691
                        which are embedded in the article 
692
                        narrative.                                 -->
693
%index-term.ent;
694

695

696
<!-- ============================================================= -->
697
<!--                    THE REST OF THE EXTERNAL MODULES INVOKED   -->
698
<!-- ============================================================= -->
699

700

701
<!--                    MATHML SETUP MODULE                        -->
702
<!--                    Invoke the MathML modules                  -->
703
%mathml3-mathmlsetup.ent;
704

705

706

707
<!--                    XHTML TABLE SETUP MODULE                   -->
708
<!--                    Set up the necessary Parameter Entity values
709
                        and then invoke XHTML (HTML 4.0) table
710
                        module                                     -->
711
%XHTMLtablesetup.ent;
712

713

714
<!--                    SPECIAL CHARACTERS DECLARATIONS            -->
715
<!--                    Standard XML special character entities
716
                        used in this DTD                           -->
717
%xmlspecchars.ent;
718

719

720
<!--                    CUSTOM SPECIAL CHARACTERS DECLARATIONS     -->
721
<!--                    Custom special character entities created
722
                        specifically for use in this DTD Suite     -->
723
%chars.ent;
724

725

726
<!--                    NOTATION DECLARATIONS MODULE               -->
727
%notat.ent;
728

729

730
<!-- ============================================================= -->
731
<!--                    PARAMETER ENTITIES FOR ATTRIBUTE LISTS     -->
732
<!-- ============================================================= -->
733

734

735
<!--                    DTD VERSION                                -->
736
<!--                    What version of this DTD was used to make
737
                        the document instance under consideration.
738
                        Note that this is a fixed value that should
739
                        change every time the DTD changes versions or
740
                        revisions.                                 -->
741
<!ENTITY % dtd-version
742
            "dtd-version
743
                        CDATA                      #FIXED '1.2'"     >
744

745

746
<!--                    ARTICLE ATTRIBUTES                         -->
747
<!--                    Attributes for the top-level element
748
                        <article>                                  -->
749
<!ENTITY % article-atts
750
            "%jats-common-atts;                                       
751
             article-type
752
                        CDATA                             #IMPLIED
753
             specific-use
754
                        CDATA                             #IMPLIED
755
             xml:lang   NMTOKEN                           'en'
756
             %dtd-version;
757
             %XLINK.xmlns.attrib;
758
             %MATHML.xmlns.attrib;
759
             %ali.xmlns.attrib;
760
             %Schema.xmlns.attrib; 
761
             %Schema.prefix;:noNamespaceSchemaLocation   
762
                        CDATA          #IMPLIED"                    >
763

764

765
<!--                    BACK ATTRIBUTES                            -->
766
<!--                    Attributes for the <back> element          -->
767
<!ENTITY % back-atts
768
            "%jats-common-atts;"                                     >
769

770

771
<!--                    BODY ATTRIBUTES                            -->
772
<!--                    Attributes for the <body> element          -->
773
<!ENTITY % body-atts
774
            "%jats-common-atts;                                       
775
             specific-use
776
                        CDATA                             #IMPLIED"  >
777

778

779
<!--                    FRONT ATTRIBUTES                           -->
780
<!--                    Attributes for the <front> element         -->
781
<!ENTITY % front-atts
782
            "%jats-common-atts;"                                     >
783

784

785
<!--                    FRONT STUB ATTRIBUTES                      -->
786
<!--                    Attributes for the <front-stub> element    -->
787
<!ENTITY % front-stub-atts
788
            "%jats-common-atts;"                                     >
789

790

791
<!--                    SUB-ARTICLE ATTRIBUTES                     -->
792
<!--                    Attributes for the <sub-article> element   -->
793
<!ENTITY % sub-article-atts
794
            "%jats-common-atts;                                       
795
             article-type
796
                        CDATA                             #IMPLIED
797
             specific-use
798
                        CDATA                             #IMPLIED
799
             xml:lang   NMTOKEN                           #IMPLIED"  >
800

801

802
<!--                    RESPONSE ATTRIBUTES                        -->
803
<!--                    Attributes for the <response> element      -->
804
<!ENTITY % response-atts
805
            "%jats-common-atts;                                       
806
             response-type
807
                        CDATA                             #IMPLIED
808
             specific-use
809
                        CDATA                             #IMPLIED
810
             xml:lang   NMTOKEN                           #IMPLIED"  >
811

812

813
<!-- ============================================================= -->
814
<!--                    JOURNAL ARTICLE ELEMENTS                   -->
815
<!-- ============================================================= -->
816

817

818
<!--                    ARTICLE MODEL (LIMITED)                    -->
819
<!--                    Article-like model used for, for example,
820
                        a short sub-article such as a news brief that
821
                        is contained in side a journal article.    -->
822
<!ENTITY % article-short-model
823
                        "((front | front-stub), body?, back?,
824
                          floats-group?)"                            >
825

826

827
<!--                    ARTICLE MODEL WITH SUB-ARTICLE OR RESPONSE -->
828
<!--                    Typical journal article model, which may
829
                        contain extended components, such as
830
                        sub-articles or responses,                 -->
831
<!ENTITY % article-full-model
832
                        "(front, body?, back?, floats-group?,
833
                          (sub-article* | response*) )"              >
834

835

836
<!--                    ARTICLE                                    -->
837
<!--                    The complete content of a journal article.
838
                        Details at:
839
                        http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=article
840
                                                                   -->
841
<!ELEMENT  article      %article-full-model;                         >
842
<!ATTLIST  article
843
             %article-atts;                                          >
844

845

846
<!-- ============================================================= -->
847
<!--                    FRONT MATTER ELEMENTS                      -->
848
<!-- ============================================================= -->
849

850

851
<!--                    FRONT MATTER MODEL                         -->
852
<!--                    Model for the <front> matter (the header
853
                        metadata) of a journal article)            -->
854
<!ENTITY % front-model  "(journal-meta?, article-meta,
855
                          (%list.class; | %front.class; |
856
                           %front-back.class;)* )"                   >
857

858

859
<!--                    FRONT MATTER                               -->
860
<!--                    The metadata concerning an article, such as
861
                        the name and issue of the journal in which it
862
                        appears and the name and author(s) of the
863
                        article.
864
                        Details at:
865
                        http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=front
866
                                                                   -->
867
<!ELEMENT  front        %front-model;                                >
868
<!ATTLIST  front
869
             %front-atts;                                            >
870

871

872
<!-- ============================================================= -->
873
<!--                    BODY ELEMENTS                              -->
874
<!-- ============================================================= -->
875

876

877
<!--                    BODY MODEL                                 -->
878
<!--                    Content model for the Body (main textual
879
                        content) of a journal article.             -->
880
<!ENTITY % body-model   "((%para-level;)*, (%sec-level;)*,
881
                          sig-block?)"                               >
882

883

884
<!--                    BODY OF THE ARTICLE                        -->
885
<!--                    The main textual portion of the article that
886
                        conveys the content.
887
                        Details at:
888
                        http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=body
889
                                                                   -->
890
<!ELEMENT  body         %body-model;                                 >
891
<!ATTLIST  body
892
             %body-atts;                                             >
893

894

895
<!-- ============================================================= -->
896
<!--                    BACK MATTER ELEMENTS                       -->
897
<!-- ============================================================= -->
898

899

900
<!--                    BACK MATTER MODEL                          -->
901
<!--                    Content model for the Back Matter (ancillary
902
                        material such as appendices) of a journal
903
                        article.                                   -->
904
<!ENTITY % back-model   "(label?, title*,
905
                          (%doc-back-matter-mix;)* )"                >
906

907

908
<!--                    BACK MATTER                                -->
909
<!--                    Ancillary or supporting material not included
910
                        as part of the main textual content of a
911
                        journal article, for example appendices and
912
                        acknowledgments.
913
                        Details at:
914
                        http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=back
915
                                                                   -->
916
<!ELEMENT  back         %back-model;                                 >
917
<!ATTLIST  back
918
             %back-atts;                                             >
919

920

921
<!-- ============================================================= -->
922
<!--                    SUB-ARTICLE                                -->
923
<!-- ============================================================= -->
924

925

926
<!--                    SUB-ARTICLE MODEL                          -->
927
<!--                    Content model for the <sub-article> element
928
                                                                   -->
929
<!ENTITY % sub-article-model
930
                        "( (front | front-stub), body?, back?,
931
                           floats-group?,
932
                           (sub-article* | response*) )"             >
933

934

935
<!--                    SUB-ARTICLE                                -->
936
<!--                    An article that is completely contained
937
                        inside another article. Both the article and
938
                        the sub-article have their own metadata.
939
                        Details at:
940
                        http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=sub-article
941
                                                                   -->
942
<!ELEMENT  sub-article  %sub-article-model;                          >
943
<!ATTLIST  sub-article
944
             %sub-article-atts;                                      >
945

946

947
<!--                    FRONT MODEL STUB                           -->
948
<!--                    Content model for the <front-stub> element,
949
                        a reduced metadata set for use in
950
                        sub-articles and responses.                -->
951
<!ENTITY % front-stub-model
952
                       "(article-id*, (%article-version.class;)?, 
953
                         article-categories?,
954
                         title-group?,
955
                         (%contrib-group.class; |
956
                          %aff-alternatives.class; | %x.class;)*,
957
                         author-notes?, ( (%pub-date.class;)* | 
958
                           pub-date-not-available?), 
959
                         volume*, volume-id*, volume-series?,
960
                         issue*, issue-id*, issue-title*,
961
                         issue-sponsor*, issue-part?, 
962
                         volume-issue-group*, isbn*,
963
                         supplement?,
964
                         ( ( (fpage, lpage?)?, page-range?) |
965
                           elocation-id )?,
966
                         (%address-link.class; | product |
967
                          supplementary-material)*,
968
                         history?, pub-history?, permissions?, 
969
                         self-uri*, (%related-article.class;)*, 
970
                         (%abstract.class;)*,
971
                         trans-abstract*, (%kwd-group.class;)*,
972
                         funding-group*, support-group*,
973
                         conference*, counts?,
974
                         custom-meta-group?)"                        >
975

976

977
<!--                    STUB FRONT METADATA                        -->
978
<!--                    A reduced metadata set for use in
979
                        sub-articles and responses, which will
980
                        inherit metadata not defined in the stub
981
                        from the enclosing article
982
                        Details at:
983
                        http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=front-stub
984
                                                                   -->
985
<!ELEMENT  front-stub   %front-stub-model;                           >
986
<!ATTLIST  front-stub
987
             %front-stub-atts;                                       >
988

989

990
<!-- ============================================================= -->
991
<!--                    RESPONSE ELEMENTS                          -->
992
<!-- ============================================================= -->
993

994

995
<!--                    RESPONSE                                   -->
996
<!--                    Reply, response, or commentary concerning the
997
                        journal article.
998
                        Details at:
999
                        http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=response
1000
                                                                   -->
1001
<!ELEMENT  response     %article-short-model;                        >
1002
<!ATTLIST  response
1003
             %response-atts;                                         >
1004

1005

1006
<!-- ================== End Journal Archiving and Interchange DTD  -->
1007

1008
Product

Resources

Company
