README.md

Notebooks Now! Submission Template

This submission template is for a simple notebook-based publication with one source file, supporting data, bibliography, and Quarto build configuration.

Source file

The source file for this template is a Jupyter notebook. There is not necessarily anything special about this notebook. It may contain markdown cells, code cells, and outputs from common Python packages, including pandas, matplotlib, plotly, seaborn, and altair.

The notebook has an additional markdown cell at the top of the document which configures Quarto to render the notebook.

Supporting material

Supplementary data

By convention, all data should be saved in data/ directory. There is nothing magic about this directory; references to your data from your notebook must still specify the correct relative path.

Supplementary images

Similar to the data/ directory, images for figures should be specified in images/ directory.

Bibliography

Bibliography entries may be specific in the document as described in the Quarto documentation.

Quarto configuration

Configuration for the example is provided by a YAML block that appears as the first cell of the Notebook.

Building output artfiacts

To build PDF/JATS output from your source data, you must have the Quarto CLI installed - you can download or learn about installation at https://quarto.org/docs/download/

Then render the article using

quarto render article.ipynb