symbolic_data.py

"""
Ideals from the Symbolic Data project

This file implements a thin wrapper for the optional symbolic data set
of ideals as published on http://www.symbolicdata.org . From the
project website:

    For different purposes algorithms and implementations are tested
    on certified and reliable data. The development of tools and data
    for such tests is usually 'orthogonal' to the main
    implementation efforts, it requires different skills and
    technologies and is not loved by programmers. On the other hand,
    in many cases tools and data could easily be reused - with slight
    modifications - across similar projects. The SymbolicData Project
    is set out to coordinate such efforts within the Computer Algebra
    Community.  Commonly collected certified and reliable data can
    also be used to compare otherwise incomparable approaches,
    algorithms, and implementations. Benchmark suites and Challenges
    for symbolic computations are not as well established as in other
    areas of computer science. This is probably due to the fact that
    there are not yet well agreed aims of such a
    benchmarking. Nevertheless various (often high quality) special
    benchmarks are scattered through the literature.  During the last
    years efforts toward collection of test data for symbolic
    computations were intensified. They focused mainly on the creation
    of general benchmarks for different areas of symbolic computation
    and the collection of such activities on different Web site.  For
    further qualification of these efforts it would be of great
    benefit to create a commonly available digital archive of these
    special benchmark data scattered through the literature. This
    would provide the community with an electronic repository of
    certified data that could be addressed and extended during further
    development.

EXAMPLES::

    sage: sd = SymbolicData(); sd # optional - database_symbolic_data
    SymbolicData with 372 ideals

    sage: sd.ZeroDim__example_1 # optional - database_symbolic_data
    Ideal (x1^2 + x2^2 - 10, x1^2 + x1*x2 + 2*x2^2 - 16) of Multivariate Polynomial Ring in x1, x2 over Rational Field

    sage: sd.Katsura_3 # optional - database_symbolic_data
    Ideal (u0 + 2*u1 + 2*u2 + 2*u3 - 1,
           u1^2 + 2*u0*u2 + 2*u1*u3 - u2,
           2*u0*u1 + 2*u1*u2 + 2*u2*u3 - u1,
           u0^2 + 2*u1^2 + 2*u2^2 + 2*u3^2 - u0) of Multivariate Polynomial Ring in u0, u1, u2, u3 over Rational Field

    sage: sd.get_ideal('Katsura_3',GF(127),'degrevlex') # optional - database_symbolic_data
    Ideal (u0 + 2*u1 + 2*u2 + 2*u3 - 1,
           u1^2 + 2*u0*u2 + 2*u1*u3 - u2,
           2*u0*u1 + 2*u1*u2 + 2*u2*u3 - u1,
           u0^2 + 2*u1^2 + 2*u2^2 + 2*u3^2 - u0) of Multivariate Polynomial Ring in u0, u1, u2, u3 over Finite Field of size 127

AUTHORS:

- Martin Albrecht <[email protected]>
"""
import os
from xml.dom.minidom import parse
from sage.rings.rational_field import QQ
from sage.rings.polynomial.polynomial_ring_constructor import PolynomialRing

class SymbolicData:
    """
    Database of ideals as distributed by the The SymbolicData Project
    (http://symbolicdata.org).

    This class needs the optional ``database_symbolic_data`` package to be
    installed.
    """
    def __init__(self):
        """
        EXAMPLES:
            sage: sd = SymbolicData(); sd # optional - database_symbolic_data
            SymbolicData with 372 ideals
        """
        path=os.environ["SAGE_ROOT"]+"/data/symbolic_data"
        self.__intpath = path + "/Data/XMLResources/INTPS/"
        self.__genpath = path + "/Data/XMLResources/GenPS/"

    def get_ideal(self, name, base_ring=QQ, term_order="degrevlex"):
        """
        Returns the ideal given by 'name' over the base ring given by
        'base_ring' in a polynomial ring with the term order given by
        'term_order'.

        INPUT:

        - ``name`` - name as on the symbolic data website
        - ``base_ring`` - base ring for the polynomial ring (default: ``QQ``)
        - ``term_order`` - term order for the polynomial ring (default: ``degrevlex``)

        OUTPUT:

            ideal as given by ``name`` in ``PolynomialRing(base_ring,vars,term_order)``

        EXAMPLES::

            sage: sd = SymbolicData() # optional - database_symbolic_data
            sage: sd.get_ideal('Katsura_3',GF(127),'degrevlex') # optional - database_symbolic_data
            Ideal (u0 + 2*u1 + 2*u2 + 2*u3 - 1,
                   u1^2 + 2*u0*u2 + 2*u1*u3 - u2,
                   2*u0*u1 + 2*u1*u2 + 2*u2*u3 - u1,
                   u0^2 + 2*u1^2 + 2*u2^2 + 2*u3^2 - u0) of Multivariate Polynomial Ring in u0, u1, u2, u3 over Finite Field of size 127
        """

        def _getTextFromNode(node):
            t = ""
            for n in node.childNodes:
                if n.nodeType == n.TEXT_NODE:
                    t += str(n.nodeValue)
                else:
                    raise NotTextNodeError
            return t

        def _dom2ideal(node):
            """
            """
            l = []

            if str(node.nodeName) in ['vars','poly']:
                l.append(_getTextFromNode(node))

            for c in node.childNodes:
                l += _dom2ideal(c)

            return l

        orig_name = name
        name = name.replace('__','.')

        try:
            name = self.__intpath + name + ".xml"
            open(name)
        except IOError:
            try:
                name = self.__genpath + name + ".xml"
                open(name)
            except IOError:
                raise AttributeError("No ideal matching '%s' found in database."%orig_name)

        dom = parse(name)
        res = _dom2ideal(dom)
        variables, polys = res[0].replace("_",""), [p.replace("_","") for p in res[1:]]

        P = PolynomialRing(base_ring, len(variables.split(",")), variables)
        I = P.ideal([P(f) for f in polys])
        return I


    def __repr__(self):
        """
        EXAMPLES::

            sage: sd = SymbolicData(); sd # optional - database_symbolic_data
            SymbolicData with 372 ideals
        """
        try:
            l = len(self.trait_names())
        except AttributeError:
            l = 0
        return "SymbolicData with %d ideals"%l

    def __getattr__(self, name):
        """
        EXAMPLES::

           sage: sd = SymbolicData() # optional - database_symbolic_data
           sage: sd.Cyclic5 # optional - database_symbolic_data
           Traceback (most recent call last):
           ...
           AttributeError: No ideal matching 'Cyclic5' found in database.

           sage: sd.Cyclic_5 # optional - database_symbolic_data
           Ideal (v + w + x + y + z,
                  v*w + w*x + x*y + v*z + y*z,
                  v*w*x + w*x*y + v*w*z + v*y*z + x*y*z,
                  v*w*x*y + v*w*x*z + v*w*y*z + v*x*y*z + w*x*y*z,
                  v*w*x*y*z - 1) of Multivariate Polynomial Ring in v, w, x, y, z over Rational Field
        """
        return self.get_ideal(name)

    def trait_names(self):
        """
        EXAMPLES::

            sage: sd = SymbolicData() # optional - database_symbolic_data
            sage: sorted(sd.trait_names())[:10] # optional - database_symbolic_data
            ['Bjoerk_8',
             'Bronstein-86',
             'Buchberger-87',
             'Butcher',
             'Caprasse',
             'Cassou',
             'Cohn_2',
             'Curves__curve10_20',
             'Curves__curve10_20',
             'Curves__curve10_30']
        """
        if hasattr(self,"__ideals"): return self.__ideals
        try:
            __ideals = [s.replace('.xml','') for s in  os.listdir(self.__intpath)]
            __ideals += [s.replace('.xml','') for s in  os.listdir(self.__genpath)]
            self.__ideals = [s.replace('.', '__') for s in __ideals]
            return self.__ideals
        except OSError:
            raise AttributeError, "Could not find symbolic data, you should perhaps install the optional package"