r"""
Basic Graphs
The methods defined here appear in :mod:`sage.graphs.graph_generators`.
"""
from sage.graphs.graph import Graph
from sage.graphs import graph
from math import sin, cos, pi
def BullGraph():
r"""
Returns a bull graph with 5 nodes.
A bull graph is named for its shape. It's a triangle with horns.
This constructor depends on `NetworkX <http://networkx.lanl.gov>`_
numeric labeling. For more information, see this
:wikipedia:`Wikipedia article on the bull graph <Bull_graph>`.
PLOTTING:
Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, the bull graph
is drawn as a triangle with the first node (0) on the bottom. The
second and third nodes (1 and 2) complete the triangle. Node 3 is
the horn connected to 1 and node 4 is the horn connected to node
2.
ALGORITHM:
Uses `NetworkX <http://networkx.lanl.gov>`_.
EXAMPLES:
Construct and show a bull graph::
sage: g = graphs.BullGraph(); g
Bull graph: Graph on 5 vertices
sage: g.show() # long time
The bull graph has 5 vertices and 5 edges. Its radius is 2, its
diameter 3, and its girth 3. The bull graph is planar with chromatic
number 3 and chromatic index also 3. ::
sage: g.order(); g.size()
5
5
sage: g.radius(); g.diameter(); g.girth()
2
3
3
sage: g.chromatic_number()
3
The bull graph has chromatic polynomial `x(x - 2)(x - 1)^3` and
Tutte polynomial `x^4 + x^3 + x^2 y`. Its characteristic polynomial
is `x(x^2 - x - 3)(x^2 + x - 1)`, which follows from the definition of
characteristic polynomials for graphs, i.e. `\det(xI - A)`, where
`x` is a variable, `A` the adjacency matrix of the graph, and `I`
the identity matrix of the same dimensions as `A`. ::
sage: chrompoly = g.chromatic_polynomial()
sage: bool(expand(x * (x - 2) * (x - 1)^3) == chrompoly)
True
sage: charpoly = g.characteristic_polynomial()
sage: M = g.adjacency_matrix(); M
[0 1 1 0 0]
[1 0 1 1 0]
[1 1 0 0 1]
[0 1 0 0 0]
[0 0 1 0 0]
sage: Id = identity_matrix(ZZ, M.nrows())
sage: D = x*Id - M
sage: bool(D.determinant() == charpoly)
True
sage: bool(expand(x * (x^2 - x - 3) * (x^2 + x - 1)) == charpoly)
True
"""
pos_dict = {0:(0,0), 1:(-1,1), 2:(1,1), 3:(-2,2), 4:(2,2)}
import networkx
G = networkx.bull_graph()
return graph.Graph(G, pos=pos_dict, name="Bull graph")
def ButterflyGraph():
r"""
Returns the butterfly graph.
Let `C_3` be the cycle graph on 3 vertices. The butterfly or bowtie
graph is obtained by joining two copies of `C_3` at a common vertex,
resulting in a graph that is isomorphic to the friendship graph `F_2`.
For more information, see this
`Wikipedia article on the butterfly graph <http://en.wikipedia.org/wiki/Butterfly_graph>`_.
.. seealso::
- :meth:`GraphGenerators.FriendshipGraph`
EXAMPLES:
The butterfly graph is a planar graph on 5 vertices and having
6 edges. ::
sage: G = graphs.ButterflyGraph(); G
Butterfly graph: Graph on 5 vertices
sage: G.show() # long time
sage: G.is_planar()
True
sage: G.order()
5
sage: G.size()
6
It has diameter 2, girth 3, and radius 1. ::
sage: G.diameter()
2
sage: G.girth()
3
sage: G.radius()
1
The butterfly graph is Eulerian, with chromatic number 3. ::
sage: G.is_eulerian()
True
sage: G.chromatic_number()
3
"""
edge_dict = {
0: [3,4],
1: [2,4],
2: [4],
3: [4]}
pos_dict = {
0: [-1, 1],
1: [1, 1],
2: [1, -1],
3: [-1, -1],
4: [0, 0]}
return graph.Graph(edge_dict, pos=pos_dict, name="Butterfly graph")
def CircularLadderGraph(n):
"""
Returns a circular ladder graph with 2\*n nodes.
A Circular ladder graph is a ladder graph that is connected at the
ends, i.e.: a ladder bent around so that top meets bottom. Thus it
can be described as two parallel cycle graphs connected at each
corresponding node pair.
This constructor depends on NetworkX numeric labels.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, the circular
ladder graph is displayed as an inner and outer cycle pair, with
the first n nodes drawn on the inner circle. The first (0) node is
drawn at the top of the inner-circle, moving clockwise after that.
The outer circle is drawn with the (n+1)th node at the top, then
counterclockwise as well.
EXAMPLES: Construct and show a circular ladder graph with 26 nodes
::
sage: g = graphs.CircularLadderGraph(13)
sage: g.show() # long time
Create several circular ladder graphs in a Sage graphics array
::
sage: g = []
sage: j = []
sage: for i in range(9):
....: k = graphs.CircularLadderGraph(i+3)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
"""
pos_dict = {}
for i in range(n):
x = float(cos((pi/2) + ((2*pi)/n)*i))
y = float(sin((pi/2) + ((2*pi)/n)*i))
pos_dict[i] = [x,y]
for i in range(n,2*n):
x = float(2*(cos((pi/2) + ((2*pi)/n)*(i-n))))
y = float(2*(sin((pi/2) + ((2*pi)/n)*(i-n))))
pos_dict[i] = (x,y)
import networkx
G = networkx.circular_ladder_graph(n)
return graph.Graph(G, pos=pos_dict, name="Circular Ladder graph")
def ClawGraph():
"""
Returns a claw graph.
A claw graph is named for its shape. It is actually a complete
bipartite graph with (n1, n2) = (1, 3).
PLOTTING: See CompleteBipartiteGraph.
EXAMPLES: Show a Claw graph
::
sage: (graphs.ClawGraph()).show() # long time
Inspect a Claw graph
::
sage: G = graphs.ClawGraph()
sage: G
Claw graph: Graph on 4 vertices
"""
pos_dict = {0:(0,1),1:(-1,0),2:(0,0),3:(1,0)}
import networkx
G = networkx.complete_bipartite_graph(1,3)
return graph.Graph(G, pos=pos_dict, name="Claw graph")
def CycleGraph(n):
r"""
Returns a cycle graph with n nodes.
A cycle graph is a basic structure which is also typically called
an n-gon.
This constructor is dependent on vertices numbered 0 through n-1 in
NetworkX ``cycle_graph()``
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, each cycle
graph will be displayed with the first (0) node at the top, with
the rest following in a counterclockwise manner.
The cycle graph is a good opportunity to compare efficiency of
filling a position dictionary vs. using the spring-layout algorithm
for plotting. Because the cycle graph is very symmetric, the
resulting plots should be similar (in cases of small n).
Filling the position dictionary in advance adds O(n) to the
constructor.
EXAMPLES: Compare plotting using the predefined layout and
networkx::
sage: import networkx
sage: n = networkx.cycle_graph(23)
sage: spring23 = Graph(n)
sage: posdict23 = graphs.CycleGraph(23)
sage: spring23.show() # long time
sage: posdict23.show() # long time
We next view many cycle graphs as a Sage graphics array. First we
use the ``CycleGraph`` constructor, which fills in the
position dictionary::
sage: g = []
sage: j = []
sage: for i in range(9):
....: k = graphs.CycleGraph(i+3)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
Compare to plotting with the spring-layout algorithm::
sage: g = []
sage: j = []
sage: for i in range(9):
....: spr = networkx.cycle_graph(i+3)
....: k = Graph(spr)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
"""
pos_dict = {}
for i in range(n):
x = float(cos((pi/2) + ((2*pi)/n)*i))
y = float(sin((pi/2) + ((2*pi)/n)*i))
pos_dict[i] = (x,y)
import networkx
G = networkx.cycle_graph(n)
return graph.Graph(G, pos=pos_dict, name="Cycle graph")
def CompleteGraph(n):
"""
Returns a complete graph on n nodes.
A Complete Graph is a graph in which all nodes are connected to all
other nodes.
This constructor is dependent on vertices numbered 0 through n-1 in
NetworkX complete_graph()
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, each complete
graph will be displayed with the first (0) node at the top, with
the rest following in a counterclockwise manner.
In the complete graph, there is a big difference visually in using
the spring-layout algorithm vs. the position dictionary used in
this constructor. The position dictionary flattens the graph,
making it clear which nodes an edge is connected to. But the
complete graph offers a good example of how the spring-layout
works. The edges push outward (everything is connected), causing
the graph to appear as a 3-dimensional pointy ball. (See examples
below).
EXAMPLES: We view many Complete graphs with a Sage Graphics Array,
first with this constructor (i.e., the position dictionary
filled)::
sage: g = []
sage: j = []
sage: for i in range(9):
....: k = graphs.CompleteGraph(i+3)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
We compare to plotting with the spring-layout algorithm::
sage: import networkx
sage: g = []
sage: j = []
sage: for i in range(9):
....: spr = networkx.complete_graph(i+3)
....: k = Graph(spr)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
Compare the constructors (results will vary)
::
sage: import networkx
sage: t = cputime()
sage: n = networkx.complete_graph(389); spring389 = Graph(n)
sage: cputime(t) # random
0.59203700000000126
sage: t = cputime()
sage: posdict389 = graphs.CompleteGraph(389)
sage: cputime(t) # random
0.6680419999999998
We compare plotting::
sage: import networkx
sage: n = networkx.complete_graph(23)
sage: spring23 = Graph(n)
sage: posdict23 = graphs.CompleteGraph(23)
sage: spring23.show() # long time
sage: posdict23.show() # long time
"""
pos_dict = {}
for i in range(n):
x = float(cos((pi/2) + ((2*pi)/n)*i))
y = float(sin((pi/2) + ((2*pi)/n)*i))
pos_dict[i] = (x,y)
import networkx
G = networkx.complete_graph(n)
return graph.Graph(G, pos=pos_dict, name="Complete graph")
def CompleteBipartiteGraph(n1, n2):
"""
Returns a Complete Bipartite Graph sized n1+n2, with each of the
nodes [0,(n1-1)] connected to each of the nodes [n1,(n2-1)] and
vice versa.
A Complete Bipartite Graph is a graph with its vertices partitioned
into two groups, V1 and V2. Each v in V1 is connected to every v in
V2, and vice versa.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, each complete
bipartite graph will be displayed with the first n1 nodes on the
top row (at y=1) from left to right. The remaining n2 nodes appear
at y=0, also from left to right. The shorter row (partition with
fewer nodes) is stretched to the same length as the longer row,
unless the shorter row has 1 node; in which case it is centered.
The x values in the plot are in domain [0,maxn1,n2].
In the Complete Bipartite graph, there is a visual difference in
using the spring-layout algorithm vs. the position dictionary used
in this constructor. The position dictionary flattens the graph and
separates the partitioned nodes, making it clear which nodes an
edge is connected to. The Complete Bipartite graph plotted with the
spring-layout algorithm tends to center the nodes in n1 (see
spring_med in examples below), thus overlapping its nodes and
edges, making it typically hard to decipher.
Filling the position dictionary in advance adds O(n) to the
constructor. Feel free to race the constructors below in the
examples section. The much larger difference is the time added by
the spring-layout algorithm when plotting. (Also shown in the
example below). The spring model is typically described as
`O(n^3)`, as appears to be the case in the NetworkX source
code.
EXAMPLES: Two ways of constructing the complete bipartite graph,
using different layout algorithms::
sage: import networkx
sage: n = networkx.complete_bipartite_graph(389,157); spring_big = Graph(n) # long time
sage: posdict_big = graphs.CompleteBipartiteGraph(389,157) # long time
Compare the plotting::
sage: n = networkx.complete_bipartite_graph(11,17)
sage: spring_med = Graph(n)
sage: posdict_med = graphs.CompleteBipartiteGraph(11,17)
Notice here how the spring-layout tends to center the nodes of n1
::
sage: spring_med.show() # long time
sage: posdict_med.show() # long time
View many complete bipartite graphs with a Sage Graphics Array,
with this constructor (i.e., the position dictionary filled)::
sage: g = []
sage: j = []
sage: for i in range(9):
....: k = graphs.CompleteBipartiteGraph(i+1,4)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
We compare to plotting with the spring-layout algorithm::
sage: g = []
sage: j = []
sage: for i in range(9):
....: spr = networkx.complete_bipartite_graph(i+1,4)
....: k = Graph(spr)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
Trac ticket #12155::
sage: graphs.CompleteBipartiteGraph(5,6).complement()
complement(Complete bipartite graph): Graph on 11 vertices
"""
pos_dict = {}
c1 = 1
c2 = 1
c3 = 0
c4 = 0
if n1 > n2:
if n2 == 1:
c4 = (n1-1)/2
else:
c2 = ((n1-1)/(n2-1))
elif n2 > n1:
if n1 == 1:
c3 = (n2-1)/2
else:
c1 = ((n2-1)/(n1-1))
for i in range(n1):
x = c1*i + c3
y = 1
pos_dict[i] = (x,y)
for i in range(n1+n2)[n1:]:
x = c2*(i-n1) + c4
y = 0
pos_dict[i] = (x,y)
import networkx
G = networkx.complete_bipartite_graph(n1,n2)
return Graph(G, pos=pos_dict, name="Complete bipartite graph")
def CompleteMultipartiteGraph(l):
r"""
Returns a complete multipartite graph.
INPUT:
- ``l`` -- a list of integers : the respective sizes
of the components.
EXAMPLE:
A complete tripartite graph with sets of sizes
`5, 6, 8`::
sage: g = graphs.CompleteMultipartiteGraph([5, 6, 8]); g
Multipartite Graph with set sizes [5, 6, 8]: Graph on 19 vertices
It clearly has a chromatic number of 3::
sage: g.chromatic_number()
3
"""
g = Graph()
for i in l:
g = g + CompleteGraph(i)
g = g.complement()
g.name("Multipartite Graph with set sizes "+str(l))
return g
def DiamondGraph():
"""
Returns a diamond graph with 4 nodes.
A diamond graph is a square with one pair of diagonal nodes
connected.
This constructor depends on NetworkX numeric labeling.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, the diamond
graph is drawn as a diamond, with the first node on top, second on
the left, third on the right, and fourth on the bottom; with the
second and third node connected.
EXAMPLES: Construct and show a diamond graph
::
sage: g = graphs.DiamondGraph()
sage: g.show() # long time
"""
pos_dict = {0:(0,1),1:(-1,0),2:(1,0),3:(0,-1)}
import networkx
G = networkx.diamond_graph()
return graph.Graph(G, pos=pos_dict, name="Diamond Graph")
def EmptyGraph():
"""
Returns an empty graph (0 nodes and 0 edges).
This is useful for constructing graphs by adding edges and vertices
individually or in a loop.
PLOTTING: When plotting, this graph will use the default
spring-layout algorithm, unless a position dictionary is
specified.
EXAMPLES: Add one vertex to an empty graph and then show::
sage: empty1 = graphs.EmptyGraph()
sage: empty1.add_vertex()
0
sage: empty1.show() # long time
Use for loops to build a graph from an empty graph::
sage: empty2 = graphs.EmptyGraph()
sage: for i in range(5):
....: empty2.add_vertex() # add 5 nodes, labeled 0-4
0
1
2
3
4
sage: for i in range(3):
....: empty2.add_edge(i,i+1) # add edges {[0:1],[1:2],[2:3]}
sage: for i in range(4)[1:]:
....: empty2.add_edge(4,i) # add edges {[1:4],[2:4],[3:4]}
sage: empty2.show() # long time
"""
return graph.Graph(sparse=True)
def ToroidalGrid2dGraph(n1, n2):
r"""
Returns a toroidal 2-dimensional grid graph with `n_1n_2` nodes (`n_1`
rows and `n_2` columns).
The toroidal 2-dimensional grid with parameters `n_1,n_2` is the
2-dimensional grid graph with identical parameters to which are added
the edges `((i,0),(i,n_2-1))` and `((0,i),(n_1-1,i))`.
EXAMPLE:
The toroidal 2-dimensional grid is a regular graph, while the usual
2-dimensional grid is not ::
sage: tgrid = graphs.ToroidalGrid2dGraph(8,9)
sage: print tgrid
Toroidal 2D Grid Graph with parameters 8,9
sage: grid = graphs.Grid2dGraph(8,9)
sage: grid.is_regular()
False
sage: tgrid.is_regular()
True
"""
g = Grid2dGraph(n1,n2)
g.add_edges([((i,0),(i,n2-1)) for i in range(n1)] + [((0,i),(n1-1,i)) for i in range(n2)])
g.name("Toroidal 2D Grid Graph with parameters "+str(n1)+","+str(n2))
d = g.get_pos()
n1 += 0.
n2 += 0.
uf = (n1/2)*(n1/2)
vf = (n2/2)*(n2/2)
for u,v in d:
x,y = d[(u,v)]
x += 0.25*(1.0+u*(u-n1+1)/uf)
y += 0.25*(1+v*(v-n2+1)/vf)
d[(u,v)] = (x,y)
return g
def Toroidal6RegularGrid2dGraph(n1, n2):
r"""
Returns a toroidal 6-regular grid.
The toroidal 6-regular grid is a 6-regular graph on `n_1\times n_2`
vertices and its elements have coordinates `(i,j)` for `i \in \{0...i-1\}`
and `j \in \{0...j-1\}`.
Its edges are those of the :meth:`ToroidalGrid2dGraph`, to which are
added the edges between `(i,j)` and `((i+1)\%n_1, (j+1)\%n_2)`.
INPUT:
- ``n1, n2`` (integers) -- see above.
EXAMPLE:
The toroidal 6-regular grid on `25` elements::
sage: g = graphs.Toroidal6RegularGrid2dGraph(5,5)
sage: g.is_regular(k=6)
True
sage: g.is_vertex_transitive()
True
sage: g.line_graph().is_vertex_transitive()
True
sage: g.automorphism_group().cardinality()
300
sage: g.is_hamiltonian()
True
TESTS:
Senseless input::
sage: graphs.Toroidal6RegularGrid2dGraph(5,2)
Traceback (most recent call last):
...
ValueError: Parameters n1 and n2 must be integers larger than 3 !
sage: graphs.Toroidal6RegularGrid2dGraph(2,0)
Traceback (most recent call last):
...
ValueError: Parameters n1 and n2 must be integers larger than 3 !
"""
if n1 <= 3 or n2 <= 3:
raise ValueError("Parameters n1 and n2 must be integers larger than 3 !")
g = ToroidalGrid2dGraph(n1,n2)
for u,v in g:
g.add_edge((u,v),((u+1)%n1,(v+1)%n2))
g.name("Toroidal Hexagonal Grid graph on "+str(n1)+"x"+str(n2)+" elements")
return g
def Grid2dGraph(n1, n2):
r"""
Returns a `2`-dimensional grid graph with `n_1n_2` nodes (`n_1` rows and
`n_2` columns).
A 2d grid graph resembles a `2` dimensional grid. All inner nodes are
connected to their `4` neighbors. Outer (non-corner) nodes are
connected to their `3` neighbors. Corner nodes are connected to their
2 neighbors.
This constructor depends on NetworkX numeric labels.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, nodes are
labelled in (row, column) pairs with `(0, 0)` in the top left corner.
Edges will always be horizontal and vertical - another advantage of
filling the position dictionary.
EXAMPLES: Construct and show a grid 2d graph Rows = `5`, Columns = `7`
::
sage: g = graphs.Grid2dGraph(5,7)
sage: g.show() # long time
TESTS:
Senseless input::
sage: graphs.Grid2dGraph(5,0)
Traceback (most recent call last):
...
ValueError: Parameters n1 and n2 must be positive integers !
sage: graphs.Grid2dGraph(-1,0)
Traceback (most recent call last):
...
ValueError: Parameters n1 and n2 must be positive integers !
The graph name contains the dimension::
sage: g = graphs.Grid2dGraph(5,7)
sage: g.name()
'2D Grid Graph for [5, 7]'
"""
if n1 <= 0 or n2 <= 0:
raise ValueError("Parameters n1 and n2 must be positive integers !")
pos_dict = {}
for i in range(n1):
y = -i
for j in range(n2):
x = j
pos_dict[i, j] = (x, y)
import networkx
G = networkx.grid_2d_graph(n1, n2)
return graph.Graph(G, pos=pos_dict, name="2D Grid Graph for "+str([n1, n2]))
def GridGraph(dim_list):
"""
Returns an n-dimensional grid graph.
INPUT:
- ``dim_list`` - a list of integers representing the
number of nodes to extend in each dimension.
PLOTTING: When plotting, this graph will use the default
spring-layout algorithm, unless a position dictionary is
specified.
EXAMPLES::
sage: G = graphs.GridGraph([2,3,4])
sage: G.show() # long time
::
sage: C = graphs.CubeGraph(4)
sage: G = graphs.GridGraph([2,2,2,2])
sage: C.show() # long time
sage: G.show() # long time
TESTS:
The graph name contains the dimension::
sage: g = graphs.GridGraph([5, 7])
sage: g.name()
'Grid Graph for [5, 7]'
sage: g = graphs.GridGraph([2, 3, 4])
sage: g.name()
'Grid Graph for [2, 3, 4]'
sage: g = graphs.GridGraph([2, 4, 3])
sage: g.name()
'Grid Graph for [2, 4, 3]'
All dimensions must be positive integers::
sage: g = graphs.GridGraph([2,-1,3])
Traceback (most recent call last):
...
ValueError: All dimensions must be positive integers !
"""
import networkx
dim = [int(a) for a in dim_list]
if any(a <= 0 for a in dim):
raise ValueError("All dimensions must be positive integers !")
G = networkx.grid_graph(list(dim))
return graph.Graph(G, name="Grid Graph for " + str(dim))
def HouseGraph():
"""
Returns a house graph with 5 nodes.
A house graph is named for its shape. It is a triangle (roof) over a
square (walls).
This constructor depends on NetworkX numeric labeling.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, the house
graph is drawn with the first node in the lower-left corner of the
house, the second in the lower-right corner of the house. The third
node is in the upper-left corner connecting the roof to the wall,
and the fourth is in the upper-right corner connecting the roof to
the wall. The fifth node is the top of the roof, connected only to
the third and fourth.
EXAMPLES: Construct and show a house graph
::
sage: g = graphs.HouseGraph()
sage: g.show() # long time
"""
pos_dict = {0:(-1,0),1:(1,0),2:(-1,1),3:(1,1),4:(0,2)}
import networkx
G = networkx.house_graph()
return graph.Graph(G, pos=pos_dict, name="House Graph")
def HouseXGraph():
"""
Returns a house X graph with 5 nodes.
A house X graph is a house graph with two additional edges. The
upper-right corner is connected to the lower-left. And the
upper-left corner is connected to the lower-right.
This constructor depends on NetworkX numeric labeling.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, the house X
graph is drawn with the first node in the lower-left corner of the
house, the second in the lower-right corner of the house. The third
node is in the upper-left corner connecting the roof to the wall,
and the fourth is in the upper-right corner connecting the roof to
the wall. The fifth node is the top of the roof, connected only to
the third and fourth.
EXAMPLES: Construct and show a house X graph
::
sage: g = graphs.HouseXGraph()
sage: g.show() # long time
"""
pos_dict = {0:(-1,0),1:(1,0),2:(-1,1),3:(1,1),4:(0,2)}
import networkx
G = networkx.house_x_graph()
return graph.Graph(G, pos=pos_dict, name="House Graph")
def LadderGraph(n):
"""
Returns a ladder graph with 2\*n nodes.
A ladder graph is a basic structure that is typically displayed as
a ladder, i.e.: two parallel path graphs connected at each
corresponding node pair.
This constructor depends on NetworkX numeric labels.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, each ladder
graph will be displayed horizontally, with the first n nodes
displayed left to right on the top horizontal line.
EXAMPLES: Construct and show a ladder graph with 14 nodes
::
sage: g = graphs.LadderGraph(7)
sage: g.show() # long time
Create several ladder graphs in a Sage graphics array
::
sage: g = []
sage: j = []
sage: for i in range(9):
....: k = graphs.LadderGraph(i+2)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
"""
pos_dict = {}
for i in range(n):
pos_dict[i] = (i,1)
for i in range(n,2*n):
x = i - n
pos_dict[i] = (x,0)
import networkx
G = networkx.ladder_graph(n)
return graph.Graph(G, pos=pos_dict, name="Ladder graph")
def LollipopGraph(n1, n2):
"""
Returns a lollipop graph with n1+n2 nodes.
A lollipop graph is a path graph (order n2) connected to a complete
graph (order n1). (A barbell graph minus one of the bells).
This constructor depends on NetworkX numeric labels.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, the complete
graph will be drawn in the lower-left corner with the (n1)th node
at a 45 degree angle above the right horizontal center of the
complete graph, leading directly into the path graph.
EXAMPLES: Construct and show a lollipop graph Candy = 13, Stick =
4
::
sage: g = graphs.LollipopGraph(13,4)
sage: g.show() # long time
Create several lollipop graphs in a Sage graphics array
::
sage: g = []
sage: j = []
sage: for i in range(6):
....: k = graphs.LollipopGraph(i+3,4)
....: g.append(k)
sage: for i in range(2):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
"""
pos_dict = {}
for i in range(n1):
x = float(cos((pi/4) - ((2*pi)/n1)*i) - n2/2 - 1)
y = float(sin((pi/4) - ((2*pi)/n1)*i) - n2/2 - 1)
j = n1-1-i
pos_dict[j] = (x,y)
for i in range(n1, n1+n2):
x = float(i - n1 - n2/2 + 1)
y = float(i - n1 - n2/2 + 1)
pos_dict[i] = (x,y)
import networkx
G = networkx.lollipop_graph(n1,n2)
return graph.Graph(G, pos=pos_dict, name="Lollipop Graph")
def PathGraph(n, pos=None):
"""
Returns a path graph with n nodes. Pos argument takes a string
which is either 'circle' or 'line', (otherwise the default is
used). See the plotting section below for more detail.
A path graph is a graph where all inner nodes are connected to
their two neighbors and the two end-nodes are connected to their
one inner neighbors. (i.e.: a cycle graph without the first and
last node connected).
This constructor depends on NetworkX numeric labels.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, the graph may
be drawn in one of two ways: The 'line' argument will draw the
graph in a horizontal line (left to right) if there are less than
11 nodes. Otherwise the 'line' argument will append horizontal
lines of length 10 nodes below, alternating left to right and right
to left. The 'circle' argument will cause the graph to be drawn in
a cycle-shape, with the first node at the top and then about the
circle in a clockwise manner. By default (without an appropriate
string argument) the graph will be drawn as a 'circle' if 10 n 41
and as a 'line' for all other n.
EXAMPLES: Show default drawing by size: 'line': n 11
::
sage: p = graphs.PathGraph(10)
sage: p.show() # long time
'circle': 10 n 41
::
sage: q = graphs.PathGraph(25)
sage: q.show() # long time
'line': n 40
::
sage: r = graphs.PathGraph(55)
sage: r.show() # long time
Override the default drawing::
sage: s = graphs.PathGraph(5,'circle')
sage: s.show() # long time
"""
pos_dict = {}
circle = False
if pos == "circle": circle = True
elif pos == "line": circle = False
elif 10 < n < 41: circle = True
if circle:
for i in range(n):
x = float(cos((pi/2) + ((2*pi)/n)*i))
y = float(sin((pi/2) + ((2*pi)/n)*i))
pos_dict[i] = (x,y)
else:
counter = 0
rem = n%10
rows = n//10
lr = True
for i in range(rows):
y = -i
for j in range(10):
if lr:
x = j
else:
x = 9 - j
pos_dict[counter] = (x,y)
counter += 1
if lr: lr = False
else: lr = True
y = -rows
for j in range(rem):
if lr:
x = j
else:
x = 9 - j
pos_dict[counter] = (x,y)
counter += 1
import networkx
G = networkx.path_graph(n)
return graph.Graph(G, pos=pos_dict, name="Path Graph")
def StarGraph(n):
"""
Returns a star graph with n+1 nodes.
A Star graph is a basic structure where one node is connected to
all other nodes.
This constructor is dependent on NetworkX numeric labels.
PLOTTING: Upon construction, the position dictionary is filled to
override the spring-layout algorithm. By convention, each star
graph will be displayed with the first (0) node in the center, the
second node (1) at the top, with the rest following in a
counterclockwise manner. (0) is the node connected to all other
nodes.
The star graph is a good opportunity to compare efficiency of
filling a position dictionary vs. using the spring-layout algorithm
for plotting. As far as display, the spring-layout should push all
other nodes away from the (0) node, and thus look very similar to
this constructor's positioning.
EXAMPLES::
sage: import networkx
Compare the plots::
sage: n = networkx.star_graph(23)
sage: spring23 = Graph(n)
sage: posdict23 = graphs.StarGraph(23)
sage: spring23.show() # long time
sage: posdict23.show() # long time
View many star graphs as a Sage Graphics Array
With this constructor (i.e., the position dictionary filled)
::
sage: g = []
sage: j = []
sage: for i in range(9):
....: k = graphs.StarGraph(i+3)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
Compared to plotting with the spring-layout algorithm
::
sage: g = []
sage: j = []
sage: for i in range(9):
....: spr = networkx.star_graph(i+3)
....: k = Graph(spr)
....: g.append(k)
sage: for i in range(3):
....: n = []
....: for m in range(3):
....: n.append(g[3*i + m].plot(vertex_size=50, vertex_labels=False))
....: j.append(n)
sage: G = sage.plot.graphics.GraphicsArray(j)
sage: G.show() # long time
"""
pos_dict = {}
pos_dict[0] = (0,0)
for i in range(1,n+1):
x = float(cos((pi/2) + ((2*pi)/n)*(i-1)))
y = float(sin((pi/2) + ((2*pi)/n)*(i-1)))
pos_dict[i] = (x,y)
import networkx
G = networkx.star_graph(n)
return graph.Graph(G, pos=pos_dict, name="Star graph")