prettydoc-architect.rmd

---

title: "R Markdown and prettydoc"
subtitle: "The Architect Theme"
author: "Harald Schilly"
date: "`r Sys.Date()`"
output:
  prettydoc::html_pretty:
    theme: architect

---

# transparent plots
library(ggplot2)
theme_set(theme_bw(base_size=12))
theme_update(panel.background = element_rect(fill = "transparent", colour = NA),
             plot.background = element_rect(fill = "transparent", colour = NA))
knitr::opts_chunk$set(dev.args=list(bg="transparent"))

Info

This is taken from http://yixuan.cos.name/prettydoc/ showcasing the "Architect" theme. Derived from work by Yixuan Qiu.

Headers

Level 4

Level 5

A demo table

	Df	Sum Sq	Mean Sq	F value	Pr(>F)
Block	5	343.3	68.66	4.447	0.01594	*
N	1	189.3	189.28	12.259	0.00437	**
P	1	8.4	8.40	0.544	0.47490
K	1	95.2	95.20	6.166	0.02880	*
N:P	1	21.3	21.28	1.378	0.26317
N:K	1	33.1	33.14	2.146	0.16865
P:K	1	0.5	0.48	0.031	0.86275
Residuals	12	185.3	15.44

Lists

There are three kinds of lies:

1. Lies

2. Damned lies

3. Statistics

   • Frequentists

   • Bayesian

   • ...

Supported highlighters in prettydoc:

• github: Style similar to Github

• vignette: Style used by rmarkdown::html_vignette

Markups

Bold, italic, don't say this.

Code

Familiar knitr R code and plots:

n <- 1000
x1  <- matrix(sort(rnorm(n, mean = 2, sd = 2.5)), ncol = 2)
x2  <- matrix(rnorm(n, mean = 2.5, sd = 2.5), ncol = 2)
x   <- rbind(x1, x2)
smoothScatter(x, xlab = "x1", ylab = "x2")
head(x)

Data Frame visualized via knitr::kable

knitr::kable(head(data.frame(x1=x1, x2=x2)))