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GAP 4.8.9 installation with standard packages -- copy to your CoCalc project to get it
Project: cocalc-sagemath-dev-slelievre
Views: 418346gap> START_TEST("HAP library"); gap> K:=ReadPDBfileAsPurePermutahedralComplex(Concatenation(dir,"data1V2X.pdb")); Reading chain containing 191 atoms. Pure permutahedral complex of dimension 3. gap> G:=KnotGroup(K); #I there are 2 generators and 1 relator of total length 6 <fp group of size infinity on the generators [ f1, f2 ]> gap> RelatorsOfFpGroup(G); [ f2*f1^-1*f2^-1*f1^-1*f2*f1 ] gap> STOP_TEST( "tst.tst", 1000 );