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GAP 4.8.9 installation with standard packages -- copy to your CoCalc project to get it

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#!/usr/bin/env perl

# Turn on autoflush
local $| = 1;


$pwd = `pwd`;
chomp $pwd;
$tstdir = "$pwd/tst";
$i = "";
$tmpdir = "/tmp/testPq";
while ( (-d "$tmpdir$i") && !(-W "$tmpdir$i") ) { $i++ }
$tmpdir .= $i;
system("rm -rf $tmpdir; mkdir $tmpdir");
print "Made dir: $tmpdir\n";

$ANUPQversion = "3.2";
$pqbinaryversion = "1.9";
$AutPGrpversion = "1.5";

$GAPversion = "4.5"; # required GAP version for ANUPQ

print "Testing installation of ANUPQ Package (version $ANUPQversion)\n\n",
      "The first two tests check that the pq C program compiled ok.\n";
$pq = "$pwd/bin/x86_64-pc-linux-gnu-gcc-default64/pq";
### standalone tests ###############################################
# Test 1
print "Test 1: Testing the pq binary ...";
check("test1.pga", "");
# Test 2
print "Test 2: Testing the pq binary's stack size ...";
check("test2.pga", "");

print "The pq C program compiled ok! We test it's the right one below.\n\n",
      "The next tests check that you have the right version of GAP\n",
      "for version $ANUPQversion of the ANUPQ package and that GAP is finding\n",
      "the right versions of the ANUPQ and AutPGrp packages.\n\n";
### GAP - ANUPQ package tests #####################################
# Test GAP
print "Checking GAP ...\n";
$pq_does_not_know_GAP = 0;
$GAP_EXEC = "gap";
if ( ($gap = $ENV{ANUPQ_GAP_EXEC}) ne "" ) {
  print " Found ANUPQ_GAP_EXEC environment variable set to: $gap\n"; 
} elsif ($GAP_EXEC ne "") {
  chomp($gap = $GAP_EXEC);
  print " pq binary made with GAP set to: $gap\n";
} else {
  $pq_does_not_know_GAP = 1;
  chomp($gap = `which gap4` || `which gap`);
  print " Found gap: $gap\n";
}
open( GAPIN, ">$tmpdir/gapinput");
print GAPIN
      "CompareVersionNumbers(VERSION, \"$GAPversion\");\n",
      "VERSION;\n",
      "SetInfoLevel(InfoWarning, 0); # switch off warning messages\n",
      "TestPackageAvailability(\"anupq\", \"$ANUPQversion\");\n",
      "if LoadPackage(\"anupq\", \"$ANUPQversion\") = true then\n",
      "  Print(GAPInfo.PackagesInfo.anupq[1].Version, \"\\n\");\n",
      "  Print(ANUPQData.version, \"\\n\");\n",
      "fi;\n",
      "TestPackageAvailability(\"autpgrp\", \"\");\n",
      "TestPackageAvailability(\"autpgrp\", \"$AutPGrpversion\");\n",
      "if LoadPackage(\"autpgrp\", \"$AutPGrpversion\") = true then\n",
      "    Print(GAPInfo.PackagesInfo.autpgrp[1].Version);\n",
      "elif LoadPackage(\"autpgrp\") = true then\n",
      "  Print(GAPInfo.PackagesInfo.autpgrp[1].Version, \"\\n\");\n",
      "fi;\n";
close GAPIN;
print " Starting GAP to determine version and package availability ...\n"; 
system("$gap -A -q -r < $tmpdir/gapinput > $tmpdir/gapout");
#print "$tmpdir/gapinput:\n";
#system("more $tmpdir/gapinput");
#print "$tmpdir/gapoutput:\n";
#system("more $tmpdir/gapoutput");
open(GAPOUT, "<$tmpdir/gapout");
$line = <GAPOUT>;
while ( $line =~ /^\#W/ ) {
  $line = <GAPOUT>;
}
$version = <GAPOUT>;
if ( $line !~ /(true|false)/ ) { # the GAP 3 case
  $version = $line;
}
$version =~ s/"//g;
chomp $version;
if ( $line =~ /true/ ) {
  print "  GAP version ($version) ... OK.\n";
} elsif ( $line =~ /false/ ) {
  die "  GAP version ($version) ... too old! At least GAP $GAPversion required!\n";
} else { 
  die "  GAP version ($version) ... please install GAP 4,",
      " at least version $GAPversion required!\n\n",
      "  If you already have a new enough version of GAP 4 installed\n",
      "  then you probably need to compile pq with an",
      " explicit GAP path, e.g.\n\n",
      "    make GAP=/usr/local/bin/gap4\n";
}
if ( ($line = <GAPOUT>) !~ /(fail|#I  Error)/ ) {
  while ( ($line = <GAPOUT>) =~ /^#I/ ) { }
  chomp ($ANUPQfoundversion = $line);
  if ($ANUPQfoundversion == $ANUPQversion) {
    print "  GAP found ANUPQ package (version $ANUPQfoundversion) ... good.\n";
  } else { # $ANUPQfoundversion > $ANUPQversion
    print "  GAP found ANUPQ package in a more recent version ",
            "($ANUPQfoundversion) ...\n",
          "   Please check your installation!\n";
  }
} else {
  die "  GAP did not find version $ANUPQversion of ANUPQ package ... \n".
      "   Please check installation instructions for ANUPQ package.\n";
}
if ( ($line = <GAPOUT>) !~ /(fail|#I  Error)/ ) {
  chomp ($pqbinaryfoundversion = $line);
  if ($pqbinaryversion eq $pqbinaryfoundversion) {
    print "  GAP found pq binary (version $pqbinaryfoundversion) ... good.\n";
  } else {
    die "  GAP found pq binary (version $pqbinaryfoundversion) ... not current!\n",
        "   ANUPQ $ANUPQversion uses version $pqbinaryversion of ",
           "the pq program.\n",
        "   It seems an earlier installation has been found?!\n";
  }
} else {
  die "  GAP does not have the appropriate pq program installed ... \n",
      "   ANUPQ $ANUPQversion uses version $pqbinaryversion of \n",
      "   the pq program.\n";
}
if ( ($line = <GAPOUT>) !~ /(fail|#I  Error)/ ) {
  if ( ($line = <GAPOUT>) !~ /(fail|#I  Error)/ ) {
    chomp ($AutPGrpfoundversion = <GAPOUT>);
    print "  GAP found AutPGrp package (version $AutPGrpfoundversion) ... good.\n";
  } else {
    chomp ($AutPGrpfoundversion = <GAPOUT>);
    die "  GAP found AutPGrp package (version $AutPGrpfoundversion) ... too old!\n",
        "   The ANUPQ package requires at least version $AutPGrpversion of ",
           "the AutPGrp package.\n";
  }
} else {
  die "  GAP does not have the AutPGrp package installed ... \n",
      "   The ANUPQ package requires the AutPGrp package \n",
      "   (at least version $AutPGrpversion) for the computation of \n",
      "   automorphism groups.\n";
}
close GAPOUT;
print " GAP is OK.\n\n";
# Test 3
print "Test 3: Checking the link between the pq binary and GAP ...";
if ( $pq_does_not_know_GAP ) {
  print " failed\n";
  die " The environment variable: ANUPQ_GAP_EXEC is not set;\n".
      " and the pq binary was made with: make ... GAP=\"\" ??\n".
      " Please check the ANUPQ package installation instructions\n".
      " and either set the environment variable: ANUPQ_GAP_EXEC, or\n".
      " re-make the pq binary setting GAP to a valid path.\n";
}
check("test3.pga", "");
# Test 4
print "Test 4: Testing the standard presentation part of the pq binary ...";
check("test4.sp", "-i -k ");
# Test 5
print "Test 5: Doing p-group generation (final GAP/ANUPQ) test ...";
open( GAPIN, ">$tmpdir/gapinput");
print GAPIN "SetInfoLevel(InfoWarning, 0); LoadPackage( \"anupq\" );;\n",
            "SetInfoLevel(InfoWarning, 1);\n",
            "SetInfoLevel(InfoANUPQ, 1);\n",
            "Test( \"tst/anupga.tst\" );\n";
close GAPIN;
system("$gap -b < $tmpdir/gapinput > $tmpdir/gapout");
open(GAPOUT, "<$tmpdir/gapout");
$seen_gap_prompt = 0;
while (<GAPOUT>) {
  $seen_gap_prompt = 1 if ( /^gap> /);
  next if ( !$seen_gap_prompt );
  if ( /^((gap> )*(\#I --|[+] |Line|$)|true$)/ ) {
    next;
  } elsif( /Pcgs\(\[ f1, f2, f3, f4 \]\) -> \[ / ) {
    next;
  } else {
    print " error.\n";
    die   " Please email the file: $tmpdir/gapout\n",
          " to Greg.Gamble\@uwa.edu.au\n";
  }
}
print " OK.\n",
      "Tests complete.\n";
system("rm -rf $tmpdir; mkdir $tmpdir");
print "Removed dir: $tmpdir\n",
      "Enjoy using your functional ANUPQ package!\n";

sub check {
  my ($file, $opts) = @_;
  (my $outfile = $file) =~ s/[.](pga|sp)/.out/;
  # run pq over test file and clean out system-dependent stuff
  system("( cd $tmpdir; ".
         "  $pq $opts< $tstdir/$file ".
         # ignore first two lines containing hostname and date information
         "  | tail -n +3 ".
         "  | grep -v seconds | grep -v '#I --' ".
         # sometimes emitted by gap-dev if a C source file CRC is out-of-date
         "  | grep -v '#W ' ". 
         # sometimes some shell escape sequence is printed
         "  | sed -e 's/.\\[\\?.\\[\\?1034h//' ".
         # sometimes Info-ed by other packages
         "  | grep -v 'GAPDoc not available' ".
         "  | grep -v '#I  default' | grep -v '#I  a method' ".
         "  | grep -v '#I  underly' | grep -v '#I  probably' ".
         "  | grep -v ' g1, g2' | grep -v '  g18, g19, g20' ".
         "  > $outfile )");

  # now the only differences with the master copy should be due to pq's banner
  my @diff = `diff $tstdir/out/$outfile $tmpdir/$outfile`;
  if ($diff[0] =~ /^0a1,2/) {
    @diff = splice(@diff, 3); #remove first three difference lines
  } 

  if (@diff == 0) {
    print " OK.\n";
  } else {
    #print " differences:\n @diff";
    if ( $file =~ /3/ ) {
      if ($ENV{ANUPQ_GAP_EXEC} ne "") {
        die " Please check the ANUPQ package installation instructions.\n"
           ." The setting of the environment variable: ANUPQ_GAP_EXEC\n"
           ." is not a valid path for GAP.\n";
      } else {
        die " Please check the ANUPQ package installation instructions.\n"
           ." Value of <path> when the pq was made with: make ... GAP=<path>\n" 
           ." is not a valid path for GAP.\n";
      }
    } else {
      if ( $file =~ /4/ && @diff == 10 && 
	   !(grep { !/^\d+d\d+$/ && !/^<.*automorphism group/ } @diff) ) {
	#differences due to not compiling with gmp
        print " OK.\n";
      } else {
        print " error.\n";
        die   " Please email the file: $tmpdir/$outfile\n",
              " to Greg.Gamble\@uwa.edu.au\n";
      }
    }
  }
}