config.log

This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by configure, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  $ ./configure 

## --------- ##
## Platform. ##
## --------- ##

hostname = project-acf3855b-c4e1-46dc-b895-ec496577848b
uname -m = x86_64
uname -r = 4.13.0-1006-gcp
uname -s = Linux
uname -v = #9-Ubuntu SMP Mon Jan 8 21:13:15 UTC 2018

/usr/bin/uname -p = unknown
/bin/uname -X     = unknown

/bin/arch              = unknown
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = unknown
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /home/user/bin
PATH: /home/user/.local/bin
PATH: /home/user/.local/bin
PATH: /home/user/.local/bin
PATH: /home/user/bin
PATH: /ext/bin
PATH: /cocalc/bin
PATH: /cocalc/src/smc-project/bin
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/lib/postgresql/9.6/bin
PATH: /ext/data/homer/bin
PATH: /ext/data/weblogo


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2179: checking for gcc
configure:2195: found /usr/bin/gcc
configure:2206: result: gcc
configure:2435: checking for C compiler version
configure:2444: gcc --version >&5
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:2455: $? = 0
configure:2444: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.5' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.5) 
configure:2455: $? = 0
configure:2444: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:2455: $? = 1
configure:2444: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:2455: $? = 1
configure:2475: checking whether the C compiler works
configure:2497: gcc    conftest.c  >&5
configure:2501: $? = 0
configure:2549: result: yes
configure:2552: checking for C compiler default output file name
configure:2554: result: a.out
configure:2560: checking for suffix of executables
configure:2567: gcc -o conftest    conftest.c  >&5
configure:2571: $? = 0
configure:2593: result: 
configure:2615: checking whether we are cross compiling
configure:2623: gcc -o conftest    conftest.c  >&5
configure:2627: $? = 0
configure:2634: ./conftest
configure:2638: $? = 0
configure:2653: result: no
configure:2658: checking for suffix of object files
configure:2680: gcc -c   conftest.c >&5
configure:2684: $? = 0
configure:2705: result: o
configure:2709: checking whether we are using the GNU C compiler
configure:2728: gcc -c   conftest.c >&5
configure:2728: $? = 0
configure:2737: result: yes
configure:2746: checking whether gcc accepts -g
configure:2766: gcc -c -g  conftest.c >&5
configure:2766: $? = 0
configure:2807: result: yes
configure:2824: checking for gcc option to accept ISO C89
configure:2887: gcc  -c -g -O2  conftest.c >&5
configure:2887: $? = 0
configure:2900: result: none needed
configure:2926: checking how to run the C preprocessor
configure:2957: gcc -E  conftest.c
configure:2957: $? = 0
configure:2971: gcc -E  conftest.c
conftest.c:9:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:2971: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:2996: result: gcc -E
configure:3016: gcc -E  conftest.c
configure:3016: $? = 0
configure:3030: gcc -E  conftest.c
conftest.c:9:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:3030: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:3059: checking for grep that handles long lines and -e
configure:3117: result: /bin/grep
configure:3122: checking for egrep
configure:3184: result: /bin/grep -E
configure:3189: checking for ANSI C header files
configure:3209: gcc -c -g -O2  conftest.c >&5
configure:3209: $? = 0
configure:3282: gcc -o conftest -g -O2   conftest.c  >&5
configure:3282: $? = 0
configure:3282: ./conftest
configure:3282: $? = 0
configure:3293: result: yes
configure:3306: checking for sys/types.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for sys/stat.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for stdlib.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for string.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for memory.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for strings.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for inttypes.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for stdint.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3306: checking for unistd.h
configure:3306: gcc -c -g -O2  conftest.c >&5
configure:3306: $? = 0
configure:3306: result: yes
configure:3322: checking size of void *
configure:3327: gcc -o conftest -g -O2   conftest.c  >&5
configure:3327: $? = 0
configure:3327: ./conftest
configure:3327: $? = 0
configure:3341: result: 8
configure:3354: checking ABI bit size
configure:3381: result: 64
configure:3422: checking build system type
configure:3436: result: x86_64-pc-linux-gnu
configure:3456: checking host system type
configure:3469: result: x86_64-pc-linux-gnu
configure:3489: checking target system type
configure:3502: result: x86_64-pc-linux-gnu
configure:3576: checking for gcc
configure:3603: result: gcc
configure:3832: checking for C compiler version
configure:3841: gcc --version >&5
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3852: $? = 0
configure:3841: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/5/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 5.4.0-6ubuntu1~16.04.5' --with-bugurl=file:///usr/share/doc/gcc-5/README.Bugs --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-5 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-5-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-5-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-5-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.5) 
configure:3852: $? = 0
configure:3841: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:3852: $? = 1
configure:3841: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:3852: $? = 1
configure:3856: checking whether we are using the GNU C compiler
configure:3884: result: yes
configure:3893: checking whether gcc accepts -g
configure:3954: result: yes
configure:3971: checking for gcc option to accept ISO C89
configure:4047: result: none needed
configure:4069: checking whether make -j2 sets $(MAKE)
configure:4091: result: yes
configure:4114: checking GAP config name
configure:4119: result: default64
configure:4184: checking for m4
configure:4200: found /usr/bin/m4
configure:4212: result: yes
configure:4409: creating ./config.status

## ---------------------- ##
## Running config.status. ##
## ---------------------- ##

This file was extended by config.status, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  CONFIG_FILES    = 
  CONFIG_HEADERS  = 
  CONFIG_LINKS    = 
  CONFIG_COMMANDS = 
  $ ./config.status 

on project-acf3855b-c4e1-46dc-b895-ec496577848b

config.status:757: creating Makefile-default64
config.status:757: creating sysinfo.gap-default64
config.status:757: creating bin/gap-default64.sh

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-pc-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_env_ABI_set=
ac_cv_env_ABI_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CONFIGNAME_set=
ac_cv_env_CONFIGNAME_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_header_inttypes_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_host=x86_64-pc-linux-gnu
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_m4_PRESENT=yes
ac_cv_prog_make_make_set=yes
ac_cv_sizeof_void_p=8
ac_cv_target=x86_64-pc-linux-gnu

## ----------------- ##
## Output variables. ##
## ----------------- ##

ABI='64'
ABI_CFLAGS=''
BASECC='gcc'
CC='gcc'
CFLAGS='-g -O2'
CONFIGNAME='default64'
COPTS=''
CPP='gcc -E'
CPPFLAGS=''
DEFS='-DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DSIZEOF_VOID_P=8'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
GAPARCH='x86_64-pc-linux-gnu-gcc-default64'
GMP_CFLAGS='-I/home/user/gap4r8/bin/x86_64-pc-linux-gnu-gcc-default64/extern/gmp/include'
GMP_LIBS='/home/user/gap4r8/bin/x86_64-pc-linux-gnu-gcc-default64/extern/gmp/lib/libgmp.a'
GMP_VER='6.0.0a'
GREP='/bin/grep'
LDFLAGS=''
LIBOBJS=''
LIBS=''
LTLIBOBJS=''
MAKE_GMP='gmp'
OBJEXT='o'
PACKAGE_BUGREPORT=''
PACKAGE_NAME=''
PACKAGE_STRING=''
PACKAGE_TARNAME=''
PACKAGE_URL=''
PACKAGE_VERSION=''
PATH_SEPARATOR=':'
SET_MAKE=''
SHELL='/bin/sh'
USE_GMP='yes'
ac_ct_CC='gcc'
bindir='${exec_prefix}/bin'
build='x86_64-pc-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE}'
dvidir='${docdir}'
exec_prefix='${prefix}'
gapdir='/home/user/gap4r8'
gp_configure_options=''
host='x86_64-pc-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
m4_PRESENT='yes'
mandir='${datarootdir}/man'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target='x86_64-pc-linux-gnu'
target_alias=''
target_cpu='x86_64'
target_os='linux-gnu'
target_vendor='pc'
wincygbin=''
wingapdir=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME ""
#define PACKAGE_TARNAME ""
#define PACKAGE_VERSION ""
#define PACKAGE_STRING ""
#define PACKAGE_BUGREPORT ""
#define PACKAGE_URL ""
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define SIZEOF_VOID_P 8

configure: exit 0