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GAP 4.8.9 installation with standard packages -- copy to your CoCalc project to get it

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#############################################################################
####
##
#A  anustab.gi                  ANUPQ package                  Eamonn O'Brien
#A                                                              Werner Nickel
##
#Y  Copyright 1993-2001,  Lehrstuhl D fuer Mathematik,  RWTH Aachen,  Germany
#Y  Copyright 1993-2001,  School of Mathematical Sciences, ANU,     Australia
##
#W  Greg Gamble reformulated the original code as a function and  then  split
#W  the original `anustab.g' into the declare/install files anustab.g[di].
##
##  Install file for function to  compute  the  stabiliser  of  an  allowable
##  subgroup; description is written to file LINK_output.
##

#############################################################################
##
#F  PqStabiliserOfAllowableSubgroup( <ANUPQglb>, <F>, <gens>, <relativeOrders>,
##  <ANUPQsize>, <ANUPQagsize>) . .  compute stabiliser of allowable subgroup
##
##  computes stabiliser and writes `LINK_output' output  file  for  the  `pq'
##  binary. The `LINK_output' file is written to `ANUPQData.tmpdir', but when
##  the `pq' binary was started up directly by the user that directory is set
##  to    the    current    directory.    The    argument    variables     of
##  `PqStabiliserOfAllowableSubgroup' are essentially the variables  assigned
##  to by `GAP_link_via_file.c' in the `pq' source code.
##
InstallGlobalFunction( PqStabiliserOfAllowableSubgroup, 
function( ANUPQglb, F, gens, relativeOrders, ANUPQsize, ANUPQagsize )
local m, n, H, pcgs, aut, NumberAgAutos, i, imgs, NumberGlAutos, p, d,
      ANUPQMaxDegree, V, elm, baseU, id, baseN, infoLevelAutGrp, LINK_output,
      soluble, a, mat;

  # number of generators 
  if Length( ANUPQglb.glAutos ) > 0 then
      m := Length (ANUPQglb.glAutos[1]);   
  elif Length( ANUPQglb.agAutos ) > 0 then
      m := Length (ANUPQglb.agAutos[1]);   
  else
      Error( "Panic: PqStabiliserOfAllowableSubgroup ",
             "called without automorphisms" );
  fi;

  # get the p-group
  n := Length (Pcgs(F));
  H := F / Subgroup (F, Pcgs(F){[m+1 .. n]}); IsPGroup(H);
  pcgs := Pcgs(H);

  # set up automorphism rec
  aut := rec();

  NumberAgAutos := Length (ANUPQglb.agAutos); 
  aut.agAutos := [1..NumberAgAutos];
  for i in [1..Length (ANUPQglb.agAutos)] do 
    Immutable( ANUPQglb.genQ[i] );
    ConvertToMatrixRep( ANUPQglb.genQ[i], ANUPQglb.F );
    imgs := List( ANUPQglb.agAutos[i], x -> PcElementByExponents( pcgs, x ) );
    aut.agAutos[i] := PGAutomorphism( H, pcgs, imgs);
    aut.agAutos[i]!.mat := ANUPQglb.genQ[i];
  od;
  aut.agAutos := Reversed( aut.agAutos );
  aut.agOrder := Reversed (relativeOrders);

  NumberGlAutos := Length( ANUPQglb.glAutos );
  aut.glAutos := [1..NumberGlAutos];
  for i in [1..NumberGlAutos] do 
    Immutable( ANUPQglb.genQ[i] );
    ConvertToMatrixRep( ANUPQglb.genQ[NumberAgAutos + i], ANUPQglb.F );
    imgs := List( ANUPQglb.glAutos[i], x -> PcElementByExponents( pcgs, x ) );
    aut.glAutos[i] := PGAutomorphism( H, pcgs, imgs);
    aut.glAutos[i]!.mat := ANUPQglb.genQ[NumberAgAutos+ i];
  od;

  aut.field    := ANUPQglb.F;
  aut.group    := H;
  if ANUPQsize <> fail then
    aut.size     := ANUPQsize;
  fi;
  aut.one      := IdentityPGAutomorphism( H );
  aut.one!.mat := IdentityMat( ANUPQglb.q, aut.field );

  # add perm oper
  p := Size( aut.field );
  d := RankPGroup( aut.group );
  #compute perm rep having at most this degree
  ANUPQMaxDegree := 10000;
  if p^d <= ANUPQMaxDegree or ANUPQsize = fail then
    V := aut.field^d;
    if ANUPQsize = fail and p^d > ANUPQMaxDegree then
        Info(InfoANUPQ + InfoWarning, 1,
             "no. of elements in vector space V is large (", p^d, ")");
        Info(InfoANUPQ + InfoWarning, 1,
             "... this may take a while, if it succeeds at all!");
    fi;
    elm := Elements( V );
    aut.glOper := [];
    for i in [1..NumberGlAutos] do
        a := aut.glAutos[i]; 
        mat := List(a!.baseimgs, 
                    x -> ExponentsOfPcElement( pcgs, x ){[1..d]});
        mat := mat * One( aut.field );
        Immutable( mat );
        ConvertToMatrixRep( mat, aut.field );
        aut.glOper[i] := Permutation( mat, elm, OnRight );
    od;
    #PrintTo("perms", "aut.glOper := ", aut.glOper,"; \n" );
    aut.glOrder := Size( Group( aut.glOper, () ) );
  else
    aut.glOrder := ANUPQsize / Size(ANUPQglb.F)^(ANUPQagsize);
  fi;

  Info(InfoANUPQ, 2, "Order of GL subgroup is ", aut.glOrder);
  Info(InfoANUPQ, 2, "No. of soluble autos is ", Length (aut.agAutos));

  # get allowable subgroup and nucleus
  baseU := gens * One (aut.field);
  id := IdentityMat( ANUPQglb.q, aut.field);
  baseN := id{[1..ANUPQglb.r]};

  # call stabilizer
  infoLevelAutGrp := InfoLevel( InfoAutGrp );
  if InfoLevel( InfoANUPQ ) >= 2 then
    SetInfoLevel( InfoAutGrp, 3 );
  fi;
  PGOrbitStabilizer( aut, baseU, baseN, false );    

  if (Length (aut.glAutos) = 0) then 
    soluble := -1;
  else 
    soluble := 0;
  fi;

  aut.agAutos := Reversed (aut.agAutos);
  aut.agOrder := Reversed (aut.agOrder);

  LINK_output := Filename( ANUPQData.tmpdir, "LINK_output" );
  PrintTo (LINK_output, soluble);
  AppendTo (LINK_output, "\n");
  AppendTo (LINK_output, Length (aut.agAutos));
  AppendTo (LINK_output, "\n");
  for i in [1..Length (aut.agOrder)] do 
    AppendTo (LINK_output, aut.agOrder[i]);
    AppendTo (LINK_output, "\n");
  od;
  AppendTo (LINK_output, Length (aut.agAutos) + Length (aut.glAutos) );
  AppendTo (LINK_output, "\n");
  for a in aut.agAutos do
    mat := List( a!.baseimgs, x -> ExponentsOfPcElement( pcgs, x ) );
    mat := Flat( mat );
    for m in mat do
        AppendTo (LINK_output, m, " " );
    od;
    AppendTo (LINK_output, "\n");
  od;
  for a in aut.glAutos do
    mat := List( a!.baseimgs, x -> ExponentsOfPcElement( pcgs, x ) );
    mat := Flat( mat );
    for m in mat do
        AppendTo (LINK_output, m, " " );
    od;
    AppendTo (LINK_output, "\n");
  od;
  SetInfoLevel( InfoAutGrp, infoLevelAutGrp );
end );

#E  anustab.gi  . . . . . . . . . . . . . . . . . . . . . . . . . . ends here